RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 KLC4Q9NSK0 619 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 IL17CQ9P0M4 197 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 PDP2Q9P2J9 529 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 CPNE7Q9UBL6 633 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 AMFRQ9UKV5 643 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 KCNK6Q9Y257 313 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 AAR2Q9Y312 384 aaKnown RBP4.72□□□□□ -1.65
CLK3-219ENST00000567805 CACNA1GO43497 2377 aa4.72□□□□□ -1.65
CLK3-219ENST00000567805 SPENQ96T58 3664 aaKnown RBP4.71□□□□□ -1.65
CLK3-219ENST00000567805 PIKFYVEQ9Y2I7 2098 aa4.71□□□□□ -1.65
CLK3-219ENST00000567805 GLYATL1P3A0A0U1RQE8 302 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 GOLGA6L9A6NEM1 432 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 C5orf60A6NFR6 353 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 LILRA5A6NI73 299 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 PRR19A6NJB7 356 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 C2orf81A6NN90 581 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 PDZK1P1A8MUH7 402 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 GOLGA6L6A8MZA4 724 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 MIF4GDA9UHW6 222 aaKnown RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 B4E171 279 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 F5H423 210 aaPredicted RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 STMND1H3BQB6 276 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 GAPDHSO14556 408 aaPredicted RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 STX7O15400 261 aaKnown RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 KCNN4O15554 427 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 KCNJ13O60928 360 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 MTX2O75431 263 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 VIPP01282 170 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 PTMAP06454 111 aaKnown RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 PYGMP11217 842 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 FGF3P11487 239 aaPredicted RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 LPOP22079 712 aaPredicted RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 IDSP22304 550 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 PSMB4P28070 264 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 ADRA1AP35348 466 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 TSPAN7P41732 249 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 HALP42357 657 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 PPM1FP49593 454 aaPredicted RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 RAB15P59190 212 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 UBE2IP63279 158 aaKnown RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 PDE1BQ01064 536 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 DMPKQ09013 629 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 NFATC2Q13469 925 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 COL9A2Q14055 689 aaPredicted RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 TAF1AQ15573 450 aaPredicted RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 CHRNA6Q15825 494 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 PLA2G4EQ3MJ16 856 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 KHDC1Q4VXA5 237 aaKnown RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 MANEAQ5SRI9 462 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 DCAF12Q5T6F0 453 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 AGAP9Q5VTM2 703 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 DARS2Q6PI48 645 aaKnown RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 ABRAXAS1Q6UWZ7 409 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 TREML4Q6UXN2 200 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 FAM151BQ6UXP7 276 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 WASH2PQ6VEQ5 465 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 RANBP10Q6VN20 620 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 PEX26Q7Z412 305 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 C11orf96Q7Z7L8 435 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 GAS2L3Q86XJ1 694 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 ZNF761Q86XN6 746 aaPredicted RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 DTX1Q86Y01 620 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 PLXDC1Q8IUK5 500 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 TRAPPC5Q8IUR0 188 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 ZNF547Q8IVP9 402 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 TRIM48Q8IWZ4 208 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 RBM12BQ8IXT5 1001 aaKnown RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 KLHDC8BQ8IXV7 354 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 BMPERQ8N8U9 685 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 ZSCAN1Q8NBB4 408 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 DDHD1Q8NEL9 900 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 GDAP1Q8TB36 358 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 CCDC110Q8TBZ0 833 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 UBE2Q2Q8WVN8 375 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 NCSTNQ92542 709 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 ALG3Q92685 438 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 WBP1Q96G27 269 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 SPATA13Q96N96 652 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 TTC25Q96NG3 672 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 C19orf43Q9BQ61 176 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 GORASP1Q9BQQ3 440 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 FICDQ9BVA6 458 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 DDA1Q9BW61 102 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 ASPSCR1Q9BZE9 553 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 C10orf88Q9H8K7 445 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 WASH6PQ9NQA3 447 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 POT1Q9NUX5 634 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 SMOXQ9NWM0 555 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 FOXJ2Q9P0K8 574 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 TMEM9Q9P0T7 183 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 SLC23A2Q9UGH3 650 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 FEZ2Q9UHY8 353 aaPredicted RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 TMPRSS11EQ9UL52 423 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 DNAJC16Q9Y2G8 782 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 PCDHB11Q9Y5F2 797 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 PCDHGA3Q9Y5H0 932 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 ARL5AQ9Y689 179 aa4.71□□□□□ -1.66
CLK3-219ENST00000567805 DNMT3AQ9Y6K1 912 aaPredicted RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 MN1Q10571 1320 aaPredicted RBP4.71□□□□□ -1.66
CLK3-219ENST00000567805 LOC100996750A0A140TA64 210 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms