RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, human

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NME3-210	ENST00000567271	MCU	Q8NE86	351 aa		21.29	■■□□□ 1
NME3-210	ENST00000567271	SLC37A2	Q8TED4	501 aa		21.29	■■□□□ 1
NME3-210	ENST00000567271	OSGEPL1	Q9H4B0	414 aa		21.29	■■□□□ 1
NME3-210	ENST00000567271		A0A1W2PQM1	296 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	OR51F1	A6NGY5	319 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	CFAP99	D6REC4	459 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	NTN3	O00634	580 aa	Predicted RBP	21.28	■■□□□ 1
NME3-210	ENST00000567271	SGTA	O43765	313 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	TCEA3	O75764	348 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	GOT2	P00505	430 aa	Known RBP	21.28	■■□□□ 1
NME3-210	ENST00000567271	RPLP0	P05388	317 aa	Known RBP	21.28	■■□□□ 1
NME3-210	ENST00000567271	SLC2A4	P14672	509 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	IDS	P22304	550 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	MGAT1	P26572	445 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	FOXN2	P32314	431 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	FASLG	P48023	281 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	DMPK	Q09013	629 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	BCL7A	Q4VC05	210 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	SYT10	Q6XYQ8	523 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	SPRED1	Q7Z699	444 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	CAND1	Q86VP6	1230 aa	Known RBP	21.28	■■□□□ 1
NME3-210	ENST00000567271	CCNJL	Q8IV13	435 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	KLHL7	Q8IXQ5	586 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	BEND7	Q8N7W2	519 aa	Predicted RBP	21.28	■■□□□ 1
NME3-210	ENST00000567271	NAT14	Q8WUY8	206 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	DEPDC7	Q96QD5	511 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	LRRN3	Q9H3W5	708 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	ACACB	O00763	2458 aa		21.28	■■□□□ 1
NME3-210	ENST00000567271	TPR	P12270	2363 aa	Known RBP	21.28	■■□□□ 1
NME3-210	ENST00000567271	KIR2DS5	A0A0G2JLQ3	304 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271		A0A0G2JNG1	304 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	OR5K4	A6NMS3	321 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	C1QTNF9B	B2RNN3	333 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	KIR2DS3	K7RE56	304 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	B4GAT1	O43505	415 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	AVIL	O75366	819 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	C1QTNF9	P0C862	333 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	MLN	P12872	115 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	ATP1B2	P14415	290 aa	Predicted RBP	21.27	■■□□□ 1
NME3-210	ENST00000567271	BIRC2	Q13490	618 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	PTK6	Q13882	451 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	SPIDR	Q14159	915 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	KIR2DS5	Q14953	304 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	DBN1	Q16643	649 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	21.27	■■□□□ 1
NME3-210	ENST00000567271	AGAP9	Q5VTM2	703 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	AFTPH	Q6ULP2	937 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	ABRAXAS1	Q6UWZ7	409 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	WASH2P	Q6VEQ5	465 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	RBM44	Q6ZP01	1051 aa	Known RBP	21.27	■■□□□ 1
NME3-210	ENST00000567271	NAT8L	Q8N9F0	302 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	OR4L1	Q8NH43	312 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	SGSM3	Q96HU1	749 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	LINC00615	Q96LM1	132 aa	Predicted RBP	21.27	■■□□□ 1
NME3-210	ENST00000567271	RUNDC3B	Q96NL0	473 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	KIFC1	Q9BW19	673 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	MRM3	Q9HC36	420 aa	Known RBP	21.27	■■□□□ 1
NME3-210	ENST00000567271	WASH6P	Q9NQA3	447 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	TREX1	Q9NSU2	369 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	SYBU	Q9NX95	663 aa		21.27	■■□□□ 1
NME3-210	ENST00000567271	SCHIP1	Q9P0W5	487 aa	Predicted RBP	21.27	■■□□□ 1
NME3-210	ENST00000567271	PDZK1P1	A8MUH7	402 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	CCDC188	H7C350	402 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	GPR3	P46089	330 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	OR1D5	P58170	312 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	ISX	Q2M1V0	245 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	UNQ6494/PRO21346	Q6UXR6	183 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	21.26	■□□□□ 0.99
NME3-210	ENST00000567271	SLC9B2	Q86UD5	537 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	PPIL6	Q8IXY8	311 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	OR6P1	Q8NGX9	317 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	CNTNAP3B	Q96NU0	1288 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	GFM1	Q96RP9	751 aa	Known RBP	21.26	■□□□□ 0.99
NME3-210	ENST00000567271	CNTNAP3	Q9BZ76	1288 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	SYNDIG1	Q9H7V2	258 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	XAB2	Q9HCS7	855 aa	Known RBP	21.26	■□□□□ 0.99
NME3-210	ENST00000567271	SARS2	Q9NP81	518 aa	Known RBP	21.26	■□□□□ 0.99
NME3-210	ENST00000567271	ASIC3	Q9UHC3	531 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	FRY	Q5TBA9	3013 aa		21.26	■□□□□ 0.99
NME3-210	ENST00000567271	KLHL33	A6NCF5	533 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	TRABD2B	A6NFA1	517 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	MGAT4D	A6NG13	374 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	GOLGA8M	H3BSY2	632 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	ZW10	O43264	779 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	CS	O75390	466 aa	Known RBP	21.25	■□□□□ 0.99
NME3-210	ENST00000567271	BRAF	P15056	766 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	XRCC1	P18887	633 aa	Predicted RBP	21.25	■□□□□ 0.99
NME3-210	ENST00000567271	RPL10	P27635	214 aa	Known RBP	21.25	■□□□□ 0.99
NME3-210	ENST00000567271	NMBR	P28336	390 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	ALDH4A1	P30038	563 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	PRLHR	P49683	370 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	DRG2	P55039	364 aa	Known RBP	21.25	■□□□□ 0.99
NME3-210	ENST00000567271	PRAME	P78395	509 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	DR1	Q01658	176 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	ITIH4	Q14624	930 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	SEPT7	Q16181	437 aa	Known RBP	21.25	■□□□□ 0.99
NME3-210	ENST00000567271	RNASEH2B	Q5TBB1	312 aa	Known RBP	21.25	■□□□□ 0.99
NME3-210	ENST00000567271	ARMC3	Q5W041	872 aa		21.25	■□□□□ 0.99
NME3-210	ENST00000567271	SYDE1	Q6ZW31	735 aa	Predicted RBP	21.25	■□□□□ 0.99
NME3-210	ENST00000567271	OR2L2	Q8NH16	312 aa		21.25	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms