RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 SLC22A25Q6T423 547 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 LRRC8DQ7L1W4 858 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 PLD3Q8IV08 490 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 SUGP1Q8IWZ8 645 aaKnown RBP1.96□□□□□ -2.1
SMG1-212ENST00000566328 Q8N377 158 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 TMEM178AQ8NBL3 297 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 OR2T12Q8NG77 320 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 SLX1AQ9BQ83 275 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 PTTG2Q9NZH5 202 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 UBA2Q9UBT2 640 aaPredicted RBP1.96□□□□□ -2.1
SMG1-212ENST00000566328 DNAJB4Q9UDY4 337 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 STK39Q9UEW8 545 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 OR14J1Q9UGF5 321 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 YIPF1Q9Y548 306 aa1.96□□□□□ -2.1
SMG1-212ENST00000566328 RB1CC1Q8TDY2 1594 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 IGHV4-61A0A0C4DH41 118 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 EIF4E1BA6NMX2 242 aaKnown RBP1.95□□□□□ -2.1
SMG1-212ENST00000566328 NBNO60934 754 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 BMP10O95393 424 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 IGHV4-59P01825 116 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 ACADMP11310 421 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 UFM1P61960 85 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 SP3Q02447 781 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 DCTN2Q13561 401 aaKnown RBP1.95□□□□□ -2.1
SMG1-212ENST00000566328 PDE1CQ14123 709 aaPredicted RBP1.95□□□□□ -2.1
SMG1-212ENST00000566328 WLSQ5T9L3 541 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 MAP3K21Q5TCX8 1036 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 LCN10Q6JVE6 187 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 FAM198BQ6UWH4 519 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 GPRIN3Q6ZVF9 776 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 ADGRA1Q86SQ6 560 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 GPALPP1Q8IXQ4 340 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 RAB42Q8N4Z0 105 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 SLC5A8Q8N695 610 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 KLHL15Q96M94 604 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 SEMA3CQ99985 751 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 PYM1Q9BRP8 204 aaKnown RBP1.95□□□□□ -2.1
SMG1-212ENST00000566328 CLEC7AQ9BXN2 247 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 PITPNM3Q9BZ71 974 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 UPF3AQ9H1J1 476 aaKnown RBP1.95□□□□□ -2.1
SMG1-212ENST00000566328 PPP1R14DQ9NXH3 145 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 GPR83Q9NYM4 423 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 FLRT3Q9NZU0 649 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 MPP6Q9NZW5 540 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 KLHL9Q9P2J3 617 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 LRWD1Q9UFC0 647 aa1.95□□□□□ -2.1
SMG1-212ENST00000566328 TDRD15B5MCY1 1934 aaKnown RBP1.95□□□□□ -2.1
SMG1-212ENST00000566328 UNC13AQ9UPW8 1703 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 ASTN2O75129 1339 aaPredicted RBP1.94□□□□□ -2.1
SMG1-212ENST00000566328 BICRAQ9NZM4 1560 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 ZNF182P17025 639 aaPredicted RBP1.94□□□□□ -2.1
SMG1-212ENST00000566328 CAPN2P17655 700 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 CBLP22681 906 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 CHKAP35790 457 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 ARL1P40616 181 aaPredicted RBP1.94□□□□□ -2.1
SMG1-212ENST00000566328 ARL4CP56559 192 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 HUNKP57058 714 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 TBX4P57082 545 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.94□□□□□ -2.1
SMG1-212ENST00000566328 COX10Q12887 443 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 MFAP5Q13361 173 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 TDGQ13569 410 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 CAMK1Q14012 370 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 FGFBP1Q14512 234 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 NECTIN1Q15223 517 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 GSTA3Q16772 222 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 FBXO47Q5MNV8 452 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 GSTA5Q7RTV2 222 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 SLC16A9Q7RTY1 509 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 CCDC13Q8IYE1 715 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 PM20D2Q8IYS1 436 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 MYCT1Q8N699 235 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 C1orf52Q8N6N3 182 aaKnown RBP1.94□□□□□ -2.1
SMG1-212ENST00000566328 EMC1Q8N766 993 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 SUSD6Q92537 303 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 IGSF8Q969P0 613 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 RRNAD1Q96FB5 475 aaKnown RBP1.94□□□□□ -2.1
SMG1-212ENST00000566328 SLC47A1Q96FL8 570 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 TMEM68Q96MH6 324 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 KRT12Q99456 494 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 SOSTQ9BQB4 213 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 RPP25Q9BUL9 199 aaKnown RBP1.94□□□□□ -2.1
SMG1-212ENST00000566328 GLIS2Q9BZE0 524 aaPredicted RBP1.94□□□□□ -2.1
SMG1-212ENST00000566328 SLC25A18Q9H1K4 315 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 RANBP17Q9H2T7 1088 aaKnown RBP1.94□□□□□ -2.1
SMG1-212ENST00000566328 TTYH1Q9H313 450 aaPredicted RBP1.94□□□□□ -2.1
SMG1-212ENST00000566328 PRKRIP1Q9H875 184 aaPredicted RBP1.94□□□□□ -2.1
SMG1-212ENST00000566328 SLC28A3Q9HAS3 691 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 ASAH2Q9NR71 780 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 SLC25A10Q9UBX3 287 aaPredicted RBP1.94□□□□□ -2.1
SMG1-212ENST00000566328 RIPOR2Q9Y4F9 1068 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 SCRIBQ14160 1630 aa1.94□□□□□ -2.1
SMG1-212ENST00000566328 NACADO15069 1562 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 BCL2L11O43521 198 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 CDC123O75794 336 aaPredicted RBP1.93□□□□□ -2.1
SMG1-212ENST00000566328 NXPH2O95156 264 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 DUS4LO95620 317 aaKnown RBP1.93□□□□□ -2.1
SMG1-212ENST00000566328 LIMK2P53671 638 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 CDR2Q01850 454 aa1.93□□□□□ -2.1
SMG1-212ENST00000566328 TAF5Q15542 800 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms