RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 RPL22P35268 128 aaKnown RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 COILP38432 576 aaPredicted RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 MAPKAPK2P49137 400 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 OXCT1P55809 520 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 YBEYP58557 167 aaPredicted RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 PPP2CBP62714 309 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 PPP2CAP67775 309 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 DSC2Q02487 901 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 IL10RBQ08334 325 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 PPIDQ08752 370 aaKnown RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 C2orf54Q08AI8 447 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ENPP2Q13822 863 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 SPARCL1Q14515 664 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 INPP5AQ14642 412 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 PRKD1Q15139 912 aaPredicted RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ACCSLQ4AC99 568 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 CYP27C1Q4G0S4 372 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 FNDC3BQ53EP0 1204 aaKnown RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 TM4SF20Q53R12 229 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 LRRC73Q5JTD7 316 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 WIPI1Q5MNZ9 446 aaPredicted RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ZNF648Q5T619 568 aaPredicted RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 FAXCQ5TGI0 409 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 C1QL3Q5VWW1 255 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 DARS2Q6PI48 645 aaKnown RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 LRFN4Q6PJG9 635 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 DPY19L3Q6ZPD9 716 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 KDELC2Q7Z4H8 507 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 PRPF39Q86UA1 669 aaKnown RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ZSWIM9Q86XI8 627 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 VSIG1Q86XK7 387 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ZNF354CQ86Y25 554 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ZGRF1Q86YA3 2104 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 KLHL7Q8IXQ5 586 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ZNF567Q8N184 647 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 STK40Q8N2I9 435 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 SH2D3CQ8N5H7 860 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 NOA1Q8NC60 698 aaKnown RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ARRDC2Q8TBH0 407 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 CCDC110Q8TBZ0 833 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 IFI44Q8TCB0 444 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ACTRT1Q8TDG2 376 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 SSC4DQ8WTU2 575 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 MAML1Q92585 1016 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 P3H4Q92791 437 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 MIB2Q96AX9 1013 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 SGSM3Q96HU1 749 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 AGAP3Q96P47 875 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 TSGA13Q96PP4 275 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 IL12RB2Q99665 862 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 TM6SF2Q9BZW4 377 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 DDX47Q9H0S4 455 aaKnown RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 NOD2Q9HC29 1040 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 NT5MQ9NPB1 228 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 RBM22Q9NW64 420 aaKnown RBP eCLIP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 FBXL12Q9NXK8 326 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 TTC7AQ9ULT0 858 aaPredicted RBP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 ATP8A1Q9Y2Q0 1164 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.15□□□□□ -1.42
UBFD1-204ENST00000565634 U3KQA8 63 aa6.15□□□□□ -1.42
UBFD1-204ENST00000565634 HIVEP1P15822 2718 aa6.15□□□□□ -1.43
UBFD1-204ENST00000565634 CELSR1Q9NYQ6 3014 aa6.15□□□□□ -1.43
UBFD1-204ENST00000565634 MYO7BQ6PIF6 2116 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TBC1D3DA0A087WVF3 549 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TBC1D3IA0A087WXS9 549 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TBC1D3EA0A087X179 549 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TBC1D3KA0A087X1G2 549 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TBC1D3FA6NER0 549 aaPredicted RBP6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TBC1D3LB9A6J9 549 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 KRIT1O00522 736 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 MID1O15344 667 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TP73O15350 636 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 KCNN4O15554 427 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 RNASEH2AO75792 299 aaKnown RBP6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TMCC1O94876 653 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TJP3O95049 919 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 PIGNO95427 931 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 MT-CYBP00156 380 aaPredicted RBP6.14□□□□□ -1.43
UBFD1-204ENST00000565634 PRLP01236 227 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 PDHA1P08559 390 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TBC1D3HP0C7X1 549 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 CD8BP10966 210 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 SFTPCP11686 197 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 MYCLP1P12525 358 aaPredicted RBP6.14□□□□□ -1.43
UBFD1-204ENST00000565634 CCNB1P14635 433 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 DESP17661 470 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 CCNCP24863 283 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 IVDP26440 423 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 SLC8A1P32418 973 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 HTR7P34969 479 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 CD96P40200 585 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 GRIA1P42261 906 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 RXRGP48443 463 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 SLC7A5Q01650 507 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TFDP2Q14188 446 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 CCNG2Q16589 344 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 EIF2S3LQ2VIR3 472 aaKnown RBP6.14□□□□□ -1.43
UBFD1-204ENST00000565634 MYLK3Q32MK0 819 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 PARP15Q460N3 678 aa6.14□□□□□ -1.43
UBFD1-204ENST00000565634 TEX44Q53QW1 395 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms