RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 MAGEA4P43358 317 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 PPARDQ03181 441 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 THOC5Q13769 683 aaKnown RBP25.62■■□□□ 1.69
NME3-208ENST00000565379 GTF2H3Q13889 308 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 ITIH4Q14624 930 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 SLMAPQ14BN4 828 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 UNC5AQ6ZN44 842 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 ANKMY2Q8IV38 441 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 SLC25A45Q8N413 288 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 TTC25Q96NG3 672 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 TCF12Q99081 682 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 WDR83Q9BRX9 315 aaKnown RBP25.62■■□□□ 1.69
NME3-208ENST00000565379 CCDC86Q9H6F5 360 aaKnown RBP25.62■■□□□ 1.69
NME3-208ENST00000565379 ANKZF1Q9H8Y5 726 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 ZDHHC3Q9NYG2 299 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 TMPRSS11EQ9UL52 423 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 NFU1Q9UMS0 254 aa25.62■■□□□ 1.69
NME3-208ENST00000565379 H3BM21 787 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 TRIM38O00635 465 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 ASMTLO95671 621 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 CEACAM5P06731 702 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 MSH3P20585 1137 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 OGNP20774 298 aaKnown RBP25.61■■□□□ 1.69
NME3-208ENST00000565379 ARNTP27540 789 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 TTPAP49638 278 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 SRP54P61011 504 aaKnown RBP25.61■■□□□ 1.69
NME3-208ENST00000565379 HP1BP3Q5SSJ5 553 aaPredicted RBP25.61■■□□□ 1.69
NME3-208ENST00000565379 NEPROQ6NW34 567 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 ZNF449Q6P9G9 518 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 CYS1Q717R9 158 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 GSDMBQ8TAX9 411 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 CFAP36Q96G28 342 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 DCUN1D1Q96GG9 259 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 SCARF2Q96GP6 870 aaPredicted RBP25.61■■□□□ 1.69
NME3-208ENST00000565379 FAM167BQ9BTA0 163 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 RRAGDQ9NQL2 400 aaPredicted RBP25.61■■□□□ 1.69
NME3-208ENST00000565379 C20orf96Q9NUD7 363 aaPredicted RBP25.61■■□□□ 1.69
NME3-208ENST00000565379 VPS9D1Q9Y2B5 631 aa25.61■■□□□ 1.69
NME3-208ENST00000565379 TMEM202A6NGA9 273 aa25.6■■□□□ 1.69
NME3-208ENST00000565379 OR51F1A6NGY5 319 aa25.6■■□□□ 1.69
NME3-208ENST00000565379 F8W8V4 182 aa25.6■■□□□ 1.69
NME3-208ENST00000565379 RASGRP1O95267 797 aa25.6■■□□□ 1.69
NME3-208ENST00000565379 TNFP01375 233 aa25.6■■□□□ 1.69
NME3-208ENST00000565379 CSF2P04141 144 aa25.6■■□□□ 1.69
NME3-208ENST00000565379 NME1P15531 152 aaKnown RBP25.6■■□□□ 1.69
NME3-208ENST00000565379 ACADVLP49748 655 aa25.6■■□□□ 1.69
NME3-208ENST00000565379 TMEM115Q12893 351 aaPredicted RBP25.6■■□□□ 1.69
NME3-208ENST00000565379 FASTKD3Q14CZ7 662 aaKnown RBP25.6■■□□□ 1.69
NME3-208ENST00000565379 RNF187Q5TA31 235 aaPredicted RBP25.6■■□□□ 1.69
NME3-208ENST00000565379 SERPINA9Q86WD7 417 aa25.6■■□□□ 1.69
NME3-208ENST00000565379 MDM1Q8TC05 714 aa25.6■■□□□ 1.69
NME3-208ENST00000565379 ZNF514Q96K75 400 aaPredicted RBP25.6■■□□□ 1.69
NME3-208ENST00000565379 TRIM56Q9BRZ2 755 aaKnown RBP25.6■■□□□ 1.69
NME3-208ENST00000565379 LAMA5O15230 3695 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 IGLV3-16A0A075B6K0 115 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 PRSS38A1L453 326 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 CDK14O94921 469 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 AKT1P31749 480 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 HNRNPKP61978 463 aaKnown RBP eCLIP25.59■■□□□ 1.69
NME3-208ENST00000565379 EIF2B5Q13144 721 aaKnown RBP25.59■■□□□ 1.69
NME3-208ENST00000565379 WDR93Q6P2C0 686 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 ADGRG6Q86SQ4 1221 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 KCNMB4Q86W47 210 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 PIANPQ8IYJ0 282 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 CERS2Q96G23 380 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 FAM96AQ9H5X1 160 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 FGF22Q9HCT0 170 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 ATXN10Q9UBB4 475 aa25.59■■□□□ 1.69
NME3-208ENST00000565379 OAS3Q9Y6K5 1087 aaKnown RBP25.59■■□□□ 1.69
NME3-208ENST00000565379 QSOX1O00391 747 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 FFAR2O15552 330 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 GPR39O43194 453 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 SIGLEC6O43699 453 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 NUAK1O60285 661 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 GIMD1P0DJR0 217 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 MYF5P13349 255 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 HOXB3P14651 431 aaPredicted RBP25.58■■□□□ 1.69
NME3-208ENST00000565379 DGKAP23743 735 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 NSG1P42857 185 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 HK3P52790 923 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 SMAD1Q15797 465 aaKnown RBP25.58■■□□□ 1.69
NME3-208ENST00000565379 DBN1Q16643 649 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 ALG11Q2TAA5 492 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 DOK6Q6PKX4 331 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 PACS1Q6VY07 963 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 TRIM74Q86UV6 250 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 RBFAQ8N0V3 343 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 OTUD6BQ8N6M0 293 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 SLC13A1Q9BZW2 595 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 OR2AG1Q9H205 316 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 DNAJC28Q9NX36 388 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 GPR34Q9UPC5 381 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 TMEM98Q9Y2Y6 226 aa25.58■■□□□ 1.69
NME3-208ENST00000565379 CHUKO15111 745 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 AP2A2O94973 939 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 ZNF7P17097 686 aaPredicted RBP25.57■■□□□ 1.68
NME3-208ENST00000565379 CDKN1CP49918 316 aaPredicted RBP25.57■■□□□ 1.68
NME3-208ENST00000565379 TYSND1Q2T9J0 566 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 PROX2Q3B8N5 592 aa25.57■■□□□ 1.68
NME3-208ENST00000565379 C3orf62Q6ZUJ4 267 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms