RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 FAM126BQ8IXS8 530 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PHACTR4Q8IZ21 702 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SCAIQ8N9R8 606 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 OR52B6Q8NGF0 335 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CALML6Q8TD86 181 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ZNF225Q9UK10 706 aa20.29■□□□□ 0.84
MAP1LC3B-206ENST00000564844 DIRAS1O95057 198 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 FADS2O95864 444 aaKnown RBP20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SLC2A3P11169 496 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 HCAR3P49019 387 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 RPS3AP61247 264 aaKnown RBP20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 EMX1Q04741 257 aaPredicted RBP20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SELENBP1Q13228 472 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SKIV2LQ15477 1246 aaKnown RBP20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 KANK2Q63ZY3 851 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SCML4Q8N228 414 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 UBE2FQ969M7 185 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TSPAN18Q96SJ8 248 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TMEM209Q96SK2 561 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SLX1AQ9BQ83 275 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 HGH1Q9BTY7 390 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 NDEL1Q9GZM8 345 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 BTN3A1O00481 513 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 RHOBTB1O94844 696 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 GSTM2P28161 218 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ATP4BP51164 291 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CLCNKBP51801 687 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 KCNC4Q03721 635 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 LAIR2Q6ISS4 152 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 APOBEC3FQ8IUX4 373 aaKnown RBP20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TMEM199Q8N511 208 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 KCTD13Q8WZ19 329 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 LEF1Q9UJU2 399 aaPredicted RBP20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 COMMD10Q9Y6G5 202 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CCDC162PA2VCL2 907 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ARVCFO00192 962 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SOAT2O75908 522 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CTSHP09668 335 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 G6PDP11413 515 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CDKN1CP49918 316 aaPredicted RBP20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 HTR6P50406 440 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TIAL1Q01085 375 aaKnown RBP eCLIP20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 RCAN2Q14206 197 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 FAM98BQ52LJ0 330 aaKnown RBP20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SGO1Q5FBB7 561 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PM20D1Q6GTS8 502 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 COLGALT2Q8IYK4 626 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CLHC1Q8NHS4 586 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PROKR1Q8TCW9 393 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 AURKBQ96GD4 344 aaPredicted RBP20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MBOAT4Q96T53 435 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 CNGB3Q9NQW8 809 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 RASSF1Q9NS23 344 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 GMIPQ9P107 970 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ADGRE2Q9UHX3 823 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ZMYM5Q9UJ78 669 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 IPPQ9Y573 584 aa20.28■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MICAL3Q7RTP6 2002 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 C16orf96A6NNT2 1141 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PRKD3O94806 890 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ZFP36L2P47974 494 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PHKG1Q16816 387 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SIRPB2Q5JXA9 342 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ANKRD13BQ86YJ7 626 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 C3orf58Q8NDZ4 430 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 BPIFB1Q8TDL5 484 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PSMG2Q969U7 264 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ABCG8Q9H221 673 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MRGBPQ9NV56 204 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 EIF2B4Q9UI10 523 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PMF1-BGLAPU3KQ54 211 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TRIM64BA6NI03 449 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TBX1O43435 398 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ECI2O75521 394 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 DLGAP3O95886 979 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 ZNF37AP17032 561 aaPredicted RBP20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 PTPRRQ15256 657 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 GTDC1Q4AE62 458 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 INTS6LQ5JSJ4 861 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 HEATR4Q86WZ0 1026 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 MCOLN3Q8TDD5 553 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 IKZF5Q9H5V7 419 aa20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 TMA7Q9Y2S6 64 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3B-206ENST00000564844 SLC1A7O00341 560 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 CD3EAPO15446 510 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 GLP2RO95838 553 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 F9P00740 461 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 HMBSP08397 361 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 PFKLP17858 780 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 POLD2P49005 469 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TRIP4Q15650 581 aaPredicted RBP20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ANKS6Q68DC2 871 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 TDRD1Q9BXT4 1180 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 LRRC3Q9BY71 257 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 ENPP5Q9UJA9 477 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 H0YAE9 185 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 UGT2B11O75310 529 aa20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 CNPP09543 421 aaKnown RBP20.26■□□□□ 0.83
MAP1LC3B-206ENST00000564844 RAB15P59190 212 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms