RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 GALNT2Q10471 571 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 GPS1Q13098 491 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 CUL1Q13616 776 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 CDH18Q13634 790 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 PTK6Q13882 451 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 HNRNPDQ14103 355 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 HLTFQ14527 1009 aaKnown RBP eCLIP4.67□□□□□ -1.661e-6■■■□□ 14.9
CDR2-203ENST00000563573 RFTN1Q14699 578 aaPredicted RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 BRD3Q15059 726 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 PDGFRLQ15198 375 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 E2F5Q15329 346 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 ZNF77Q15935 545 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 P3H1Q32P28 736 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 TEX44Q53QW1 395 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 ALFQ53S48 1182 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 FAM78AQ5JUQ0 283 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 MARC1Q5VT66 337 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 RNF219Q5W0B1 726 aaPredicted RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 DUPD1Q68J44 220 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 ITPRIPL1Q6GPH6 555 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 TANGO2Q6ICL3 276 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 RETSATQ6NUM9 610 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 WDR93Q6P2C0 686 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 TTC27Q6P3X3 843 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 CCNI2Q6ZMN8 369 aaPredicted RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 FRMD7Q6ZUT3 714 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 STRA8Q7Z7C7 330 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 NLRP14Q86W24 1093 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 MFN1Q8IWA4 741 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 FAM217AQ8IXS0 508 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 ZNF683Q8IZ20 524 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 DEFB123Q8N688 67 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 FAM71DQ8N9W8 422 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 FIBINQ8TAL6 211 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 CSGALNACT1Q8TDX6 532 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 CHAC2Q8WUX2 184 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 DEPDC1BQ8WUY9 529 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 PPM1EQ8WY54 764 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 SLCO2A1Q92959 643 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 ARHGEF2Q92974 986 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 ATP2A3Q93084 1043 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 WBP2Q969T9 261 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 EXOC4Q96A65 974 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 P2RY11Q96G91 374 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 SNF8Q96H20 258 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 CELF6Q96J87 481 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 MSLNLQ96KJ4 702 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 ZNF599Q96NL3 588 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 QKIQ96PU8 341 aaKnown RBP eCLIP4.67□□□□□ -1.662e-7■■■■□ 25.5
CDR2-203ENST00000563573 LGMNQ99538 433 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 HERPUD2Q9BSE4 406 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 BBS2Q9BXC9 721 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 PARD6BQ9BYG5 372 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 SLC2A11Q9BYW1 496 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 FAM129AQ9BZQ8 928 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 TRIM31Q9BZY9 425 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 TOR3AQ9H497 397 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 USP29Q9HBJ7 922 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 H2AFY2Q9P0M6 372 aaPredicted RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 MTRF1LQ9UGC7 380 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 IPO11Q9UI26 975 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 CCL26Q9Y258 94 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 TBC1D30Q9Y2I9 924 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 SNX24Q9Y343 169 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 MYOFQ9NZM1 2061 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 MIA3Q5JRA6 1907 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 CHD5Q8TDI0 1954 aa4.67□□□□□ -1.66
CDR2-203ENST00000563573 SPTBN5Q9NRC6 3674 aaKnown RBP4.67□□□□□ -1.66
CDR2-203ENST00000563573 MYO18AQ92614 2054 aaKnown RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 A0A1W2PR48 441 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 NEDD8-MDP1E9PL57 170 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 AP3B1O00203 1094 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 RNASET2O00584 256 aaKnown RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 DYNC1I1O14576 645 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 DNALI1O14645 258 aaPredicted RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 CHADO15335 359 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 TBX10O75333 385 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 ECI2O75521 394 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 JCHAINP01591 159 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 CCNB1P14635 433 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 TYRP14679 529 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 ETS1P14921 441 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 BPIP17213 487 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 POLR2EP19388 210 aaKnown RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 MGAT1P26572 445 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 RPL22P35268 128 aaKnown RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 CASRP41180 1078 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 VPS41P49754 854 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 PLTPP55058 493 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 RPS24P62847 133 aaKnown RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 BASP1P80723 227 aaKnown RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 MRPS25P82663 173 aaKnown RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 SULT2A1Q06520 285 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 RUNX3Q13761 415 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 DMC1Q14565 340 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 DHCR24Q15392 516 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 TRIP13Q15645 432 aaPredicted RBP4.66□□□□□ -1.66
CDR2-203ENST00000563573 PARP6Q2NL67 630 aa4.66□□□□□ -1.66
CDR2-203ENST00000563573 FAM214AQ32MH5 1076 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms