RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 WDR46O15213 610 aaKnown RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 PLOD3O60568 738 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 PRDM1O75626 825 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 MTA2O94776 668 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 RPN1P04843 607 aaKnown RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 FGF3P11487 239 aaPredicted RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 EEF2P13639 858 aaKnown RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 SLC2A4P14672 509 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 CHMP24386 653 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 RPL3P39023 403 aaKnown RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 NT5C2P49902 561 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 HDAC4P56524 1084 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 SEC61A1P61619 476 aaKnown RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 NFIL3Q16649 462 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 PRAMEF19Q5SWL8 479 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 CAPRIN2Q6IMN6 1127 aaKnown RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 TYW3Q6IPR3 259 aaKnown RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 FBXO46Q6PJ61 603 aaPredicted RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 CREB3L2Q70SY1 520 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 GALNT5Q7Z7M9 940 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 TBC1D10CQ8IV04 446 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 SFTPA2Q8IWL1 248 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 MB21D2Q8IYB1 491 aaPredicted RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 CLIP4Q8N3C7 705 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 ANKRD52Q8NB46 1076 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 CLEC18CQ8NCF0 446 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 CD99L2Q8TCZ2 262 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 RUFY2Q8WXA3 655 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 HVCN1Q96D96 273 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 TXNDC15Q96J42 360 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 SLC25A33Q9BSK2 321 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 MMTAG2Q9BU76 263 aaKnown RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 MSTO1Q9BUK6 570 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 CCDC68Q9H2F9 335 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 C6orf106Q9H6K1 298 aaPredicted RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 SH2D4AQ9H788 454 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 VCPKMTQ9H867 229 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 NKIRAS2Q9NYR9 191 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 NYAP2Q9P242 653 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 AGO1Q9UL18 857 aaKnown RBP4.97□□□□□ -1.61
LINC00254-201ENST00000563416 DNAH12Q6ZR08 3092 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 NEDD4P46934 1319 aa4.97□□□□□ -1.61
LINC00254-201ENST00000563416 PABPN1LA6NDY0 278 aaKnown RBP4.96□□□□□ -1.62
LINC00254-201ENST00000563416 ATP2C2O75185 946 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 CNMDO75829 334 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 VDRP11473 427 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 PLA2G2AP14555 144 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 ART1P52961 327 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 CASP6P55212 293 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 PRMT2P55345 433 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 IRX3P78415 501 aaPredicted RBP4.96□□□□□ -1.62
LINC00254-201ENST00000563416 TFAP4Q01664 338 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 CTTNQ14247 550 aaKnown RBP4.96□□□□□ -1.62
LINC00254-201ENST00000563416 KRT32Q14532 448 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 ARHGEF6Q15052 776 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 FAM205BPQ63HN1 556 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 ACAD10Q6JQN1 1059 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 CES5AQ6NT32 575 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 TBC1D26Q86UD7 250 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 FAM160B2Q86V87 743 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 ZNF444Q8N0Y2 327 aaPredicted RBP4.96□□□□□ -1.62
LINC00254-201ENST00000563416 ANKRD13CQ8N6S4 541 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 LSMEM1Q8N8F7 131 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 GPT2Q8TD30 523 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 TRIB2Q92519 343 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 ZUFSPQ96AP4 578 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 ABHD8Q96I13 439 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 CTAGE1Q96RT6 745 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 SDF4Q9BRK5 362 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 PHF7Q9BWX1 381 aaPredicted RBP4.96□□□□□ -1.62
LINC00254-201ENST00000563416 PAIP1Q9H074 479 aaKnown RBP4.96□□□□□ -1.62
LINC00254-201ENST00000563416 INTS2Q9H0H0 1204 aaKnown RBP4.96□□□□□ -1.62
LINC00254-201ENST00000563416 RNF41Q9H4P4 317 aaPredicted RBP4.96□□□□□ -1.62
LINC00254-201ENST00000563416 RPAP3Q9H6T3 665 aaPredicted RBP4.96□□□□□ -1.62
LINC00254-201ENST00000563416 CLK4Q9HAZ1 481 aaKnown RBP4.96□□□□□ -1.62
LINC00254-201ENST00000563416 TCP11L1Q9NUJ3 509 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 PEMTQ9UBM1 199 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 NDRG3Q9UGV2 375 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 TRIM17Q9Y577 477 aa4.96□□□□□ -1.62
LINC00254-201ENST00000563416 GAGE10A6NGK3 116 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 TSPY2A6NKD2 308 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 TEX22C9J3V5 150 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 F5H6K3 240 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 USO1O60763 962 aaKnown RBP4.95□□□□□ -1.62
LINC00254-201ENST00000563416 SCGB1D1O95968 90 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 NDUFB10O96000 172 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 HNRNPA1P09651 372 aaKnown RBP eCLIP4.95□□□□□ -1.62
LINC00254-201ENST00000563416 TSPY3P0CV98 308 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 TSPY8P0CW00 308 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 POU1F1P28069 291 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 RYKP34925 604 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 PSMC4P43686 418 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 MXI1P50539 228 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 CLCN5P51795 746 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 CDH15P55291 814 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 ARF3P61204 181 aaPredicted RBP4.95□□□□□ -1.62
LINC00254-201ENST00000563416 HAND2P61296 217 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 ARF1P84077 181 aaKnown RBP4.95□□□□□ -1.62
LINC00254-201ENST00000563416 KLRC3Q07444 240 aa4.95□□□□□ -1.62
LINC00254-201ENST00000563416 COG2Q14746 738 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms