RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 GALK2Q01415 458 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SLC5A12Q1EHB4 618 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ALKBH6Q3KRA9 238 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CEP85LQ5SZL2 805 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 Q6ZNB5 142 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 FRMD5Q7Z6J6 570 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 LRRC8AQ8IWT6 810 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CFAP206Q8IYR0 622 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CLYBLQ8N0X4 340 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 TBC1D19Q8N5T2 526 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 C8orf58Q8NAV2 365 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 OR6B3Q8NGW1 331 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 PAQR8Q8TEZ7 354 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CACNG8Q8WXS5 425 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ING5Q8WYH8 240 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 RAPGEF4Q8WZA2 1011 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 COPS5Q92905 334 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SAAL1Q96ER3 474 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 OXNAD1Q96HP4 312 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 ZNF558Q96NG5 402 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SLC12A9Q9BXP2 914 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SEMA4CQ9C0C4 833 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 MTIF3Q9H2K0 278 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 BTG4Q9NY30 223 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 AHSPQ9NZD4 102 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 MPP6Q9NZW5 540 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 WNT16Q9UBV4 365 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 TJP2Q9UDY2 1190 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SERGEFQ9UGK8 458 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 AP3M1Q9Y2T2 418 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 RHBDD3Q9Y3P4 386 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SOS2Q07890 1332 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 WIPF3A6NGB9 483 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SNTNA6NMZ2 147 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 A8MZ25 164 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CALUO43852 315 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 GAS8O95995 478 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 AGTP01019 485 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 IL6P05231 212 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 PLS3P13797 630 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 GSPT1P15170 499 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 ATP6V1C1P21283 382 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ZNF10P21506 573 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 ACP1P24666 158 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CCND3P30281 292 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 VIPR2P41587 438 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SYKP43405 635 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CSNK1EP49674 416 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 ERFP50548 548 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CDK7P50613 346 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SNU13P55769 128 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 CORO7P57737 925 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 HNRNPKP61978 463 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMG1-207ENST00000563235 PSMC5P62195 406 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 RPL7AP62424 266 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 S100A12P80511 92 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 MZT1Q08AG7 82 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 RUNX2Q13950 521 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ZRSR1Q15695 479 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 FAM189A2Q15884 450 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 PRRT3Q5FWE3 981 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 FAM171A1Q5VUB5 890 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ARHGEF16Q5VV41 709 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ARL6IP4Q66PJ3 421 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 MAMDC4Q6UXC1 1216 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 MED25Q71SY5 747 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 NEK8Q86SG6 692 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 MMP21Q8N119 569 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ZBTB2Q8N680 514 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SNIP1Q8TAD8 396 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 UBA3Q8TBC4 463 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CAPSLQ8WWF8 208 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 RSC1A1Q92681 617 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ST6GALNAC6Q969X2 333 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 MCRS1Q96EZ8 462 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ABHD8Q96I13 439 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ZSCAN10Q96SZ4 725 aaPredicted RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 RIT2Q99578 217 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 TMEM246Q9BRR3 403 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 MECRQ9BV79 373 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 SNX25Q9H3E2 840 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CENPHQ9H3R5 247 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMG1-207ENST00000563235 KCNK4Q9NYG8 393 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 BTBD3Q9Y2F9 522 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 PADI2Q9Y2J8 665 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 CFAP20Q9Y6A4 193 aaKnown RBP4.73□□□□□ -1.65
SMG1-207ENST00000563235 PNPLA6Q8IY17 1366 aa4.73□□□□□ -1.65
SMG1-207ENST00000563235 ASXL1Q8IXJ9 1541 aa4.72□□□□□ -1.65
SMG1-207ENST00000563235 MAST1Q9Y2H9 1570 aa4.72□□□□□ -1.65
SMG1-207ENST00000563235 OOEPA6NGQ2 149 aa4.72□□□□□ -1.65
SMG1-207ENST00000563235 NPIPB13A6NJU9 1138 aa4.72□□□□□ -1.65
SMG1-207ENST00000563235 FAM177BA6PVY3 158 aa4.72□□□□□ -1.65
SMG1-207ENST00000563235 NPIPB4C9JG80 1138 aa4.72□□□□□ -1.65
SMG1-207ENST00000563235 KBTBD13C9JR72 458 aa4.72□□□□□ -1.65
SMG1-207ENST00000563235 PGRMC1O00264 195 aaKnown RBP4.72□□□□□ -1.65
SMG1-207ENST00000563235 SCDO00767 359 aa4.72□□□□□ -1.65
SMG1-207ENST00000563235 RNF8O76064 485 aa4.72□□□□□ -1.65
SMG1-207ENST00000563235 ITGA4P13612 1032 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms