RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 A6NCN8 305 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 TP73O15350 636 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 GRID2O43424 1007 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 TRIM16O95361 564 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 GP1BAP07359 652 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 CDK4P11802 303 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 MC4RP32245 332 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 GPC1P35052 558 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 NPY2RP49146 381 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 RNF144AP50876 292 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 CLCNKAP51800 687 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 TMPRSS15P98073 1019 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 B4GALNT1Q00973 533 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SKIDA1Q1XH10 827 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 CCDC38Q502W7 563 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 PCID2Q5JVF3 399 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 RNASEH2BQ5TBB1 312 aaKnown RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SYDE1Q6ZW31 735 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 ZNF572Q7Z3I7 529 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 RAB44Q7Z6P3 723 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 TAF8Q7Z7C8 310 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SFTPA2Q8IWL1 248 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 NAGSQ8N159 534 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 NXPE1Q8N323 547 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 ARL10Q8N8L6 244 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 RASGEF1AQ8N9B8 481 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 FAM46DQ8NEK8 389 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SPATA4Q8NEY3 305 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 C16orf45Q96MC5 204 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 RUNDC3BQ96NL0 473 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 KIFC1Q9BW19 673 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SUDS3Q9H7L9 328 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 CHRAC1Q9NRG0 131 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 BFARQ9NZS9 450 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 TAAR2Q9P1P5 351 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 GULP1Q9UBP9 304 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SLC2A6Q9UGQ3 507 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 GPR34Q9UPC5 381 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 APOBEC2Q9Y235 224 aaKnown RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 PRKAB1Q9Y478 270 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 PLXNB3Q9ULL4 1909 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 GOLGA4Q13439 2230 aaKnown RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 NCOR2Q9Y618 2525 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 FAM221BA6H8Z2 402 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 FIGNL2A6NMB9 653 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 DNALI1O14645 258 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SGTAO43765 313 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 AVILO75366 819 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 RFPL3O75679 317 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 TUBB4AP04350 444 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 MYF5P13349 255 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 ITGALP20701 1170 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 FOXN2P32314 431 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 CDKN1CP49918 316 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 CTSCP53634 463 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SESN2P58004 480 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SARNPP82979 210 aaKnown RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SHC2P98077 582 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 FOXK2Q01167 660 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SEPT6Q14141 434 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 DHX34Q14147 1143 aaKnown RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 HLTFQ14527 1009 aaKnown RBP eCLIP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 PPP1R7Q15435 360 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 TCEA2Q15560 299 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SMAD1Q15797 465 aaKnown RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 MICALCLQ6ZW33 695 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 CHST15Q7LFX5 561 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 LRRTM4Q86VH4 590 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 JAMLQ86YT9 394 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 KLHL7Q8IXQ5 586 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 PIANPQ8IYJ0 282 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 AGGF1Q8N302 714 aaeCLIP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 PNPLA1Q8N8W4 532 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 RNF217Q8TC41 542 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 ULK4Q96C45 1275 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SERPINB12Q96P63 405 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 TIMM29Q9BSF4 260 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 ZCCHC2Q9C0B9 1178 aaKnown RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 DPEP2Q9H4A9 486 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 MRM3Q9HC36 420 aaKnown RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 XAB2Q9HCS7 855 aaKnown RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 SLC23A2Q9UGH3 650 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 ZNHIT2Q9UHR6 403 aa6.1□□□□□ -1.43
CNOT1-204ENST00000563130 DNMT3AQ9Y6K1 912 aaPredicted RBP6.1□□□□□ -1.43
CNOT1-204ENST00000563130 CCDC78A2IDD5 438 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 CCDC162PA2VCL2 907 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 KMOO15229 486 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 TTI1O43156 1089 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 KCNJ13O60928 360 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 PRSS56P0CW18 603 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 ACP5P13686 325 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 ACRV1P26436 265 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 MGAT1P26572 445 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 ARNTP27540 789 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 ACTR1BP42025 376 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 DUSP3P51452 185 aaPredicted RBP6.09□□□□□ -1.43
CNOT1-204ENST00000563130 ACTR1AP61163 376 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 CRADDP78560 199 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 DAB2P98082 770 aa6.09□□□□□ -1.43
CNOT1-204ENST00000563130 DR1Q01658 176 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms