RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 NAGSQ8N159 534 aa16.33■□□□□ 0.2
CDT1-202ENST00000562747 CCDC74AQ96AQ1 378 aa16.33■□□□□ 0.2
CDT1-202ENST00000562747 SLC46A1Q96NT5 459 aa16.33■□□□□ 0.2
CDT1-202ENST00000562747 DPH1Q9BZG8 443 aa16.33■□□□□ 0.2
CDT1-202ENST00000562747 ASB8Q9H765 288 aa16.33■□□□□ 0.2
CDT1-202ENST00000562747 CASS4Q9NQ75 786 aa16.33■□□□□ 0.2
CDT1-202ENST00000562747 KCND1Q9NSA2 647 aa16.33■□□□□ 0.2
CDT1-202ENST00000562747 NLE1Q9NVX2 485 aaPredicted RBP16.33■□□□□ 0.2
CDT1-202ENST00000562747 PIH1D1Q9NWS0 290 aaKnown RBP16.33■□□□□ 0.2
CDT1-202ENST00000562747 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.33■□□□□ 0.2
CDT1-202ENST00000562747 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.32■□□□□ 0.2
CDT1-202ENST00000562747 MROH6A6NGR9 719 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 AP3B1O00203 1094 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 GPR39O43194 453 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 ZFC3H1O60293 1989 aaKnown RBP16.32■□□□□ 0.2
CDT1-202ENST00000562747 PHF2O75151 1096 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 ECEL1O95672 775 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 ACP5P13686 325 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 ITGALP20701 1170 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 PSMA3P25788 255 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 COILP38432 576 aaPredicted RBP16.32■□□□□ 0.2
CDT1-202ENST00000562747 BASP1P80723 227 aaKnown RBP16.32■□□□□ 0.2
CDT1-202ENST00000562747 TMPRSS15P98073 1019 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 CDK16Q00536 496 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 PAPD7Q5XG87 772 aaKnown RBP16.32■□□□□ 0.2
CDT1-202ENST00000562747 TTC27Q6P3X3 843 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 CCDC137Q6PK04 289 aaKnown RBP16.32■□□□□ 0.2
CDT1-202ENST00000562747 CRTC3Q6UUV7 619 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 SNX20Q7Z614 316 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 SFTPA2Q8IWL1 248 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 ULK4Q96C45 1275 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 DNAJC1Q96KC8 554 aaKnown RBP16.32■□□□□ 0.2
CDT1-202ENST00000562747 ARHGEF17Q96PE2 2063 aaPredicted RBP16.32■□□□□ 0.2
CDT1-202ENST00000562747 RANBP9Q96S59 729 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 NAPGQ99747 312 aaPredicted RBP16.32■□□□□ 0.2
CDT1-202ENST00000562747 TIMM29Q9BSF4 260 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 SMARCAL1Q9NZC9 954 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 KCNK6Q9Y257 313 aa16.32■□□□□ 0.2
CDT1-202ENST00000562747 HEATR9A2RTY3 570 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 CDRT15L2A8MXV6 281 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 ZNF185O15231 689 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 KCNJ13O60928 360 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 TCEA3O75764 348 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 SLC2A4P14672 509 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 ZNF7P17097 686 aaPredicted RBP16.31■□□□□ 0.2
CDT1-202ENST00000562747 TPSB2P20231 275 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 CA5AP35218 305 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 GRIA1P42261 906 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 FNTAP49354 379 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 TPSAB1Q15661 275 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 INSCQ1MX18 579 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 SKIDA1Q1XH10 827 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 GPR33Q49SQ1 333 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 FOXR1Q6PIV2 292 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 RBM44Q6ZP01 1051 aaKnown RBP16.31■□□□□ 0.2
CDT1-202ENST00000562747 TRAPPC5Q8IUR0 188 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 ZNF547Q8IVP9 402 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 ARL14Q8N4G2 192 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 CDKN2AIPNLQ96HQ2 116 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 ZNF514Q96K75 400 aaPredicted RBP16.31■□□□□ 0.2
CDT1-202ENST00000562747 KLC4Q9NSK0 619 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 LRIT1Q9P2V4 623 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 RABGEF1Q9UJ41 708 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 CRLS1Q9UJA2 301 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 RIMKLBQ9ULI2 386 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 DNMT3AQ9Y6K1 912 aaPredicted RBP16.31■□□□□ 0.2
CDT1-202ENST00000562747 SLC30A1Q9Y6M5 507 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 RNF215Q9Y6U7 377 aa16.31■□□□□ 0.2
CDT1-202ENST00000562747 K7ENP7 123 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 NTN3O00634 580 aaPredicted RBP16.3■□□□□ 0.2
CDT1-202ENST00000562747 KRT14P02533 472 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 VCLP18206 1134 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 MSH3P20585 1137 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 ADRA1DP25100 572 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 RBMS1P29558 406 aaKnown RBP16.3■□□□□ 0.2
CDT1-202ENST00000562747 AKT1P31749 480 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 MC4RP32245 332 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 MAZP56270 477 aaKnown RBP16.3■□□□□ 0.2
CDT1-202ENST00000562747 NR1D2Q14995 579 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 INO80CQ6PI98 192 aaPredicted RBP16.3■□□□□ 0.2
CDT1-202ENST00000562747 NLRP9Q7RTR0 991 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 ZNF438Q7Z4V0 828 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 RASGEF1AQ8N9B8 481 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 GRK7Q8WTQ7 553 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 HEXDCQ8WVB3 486 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 PEX13Q92968 403 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 GRAMD1AQ96CP6 724 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 TBC1D29Q9UFV1 150 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 PCDHGA8Q9Y5G5 932 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 SAR1BQ9Y6B6 198 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 MAST4O15021 2626 aa16.3■□□□□ 0.2
CDT1-202ENST00000562747 PIEZO2Q9H5I5 2752 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 TRBV5-4A0A0C4DH59 114 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 CTAGE9A4FU28 777 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 A6NCN8 305 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 PRR19A6NJB7 356 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 OR5K4A6NMS3 321 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 RHPN2P1A8MT19 583 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 B8ZZF3 427 aa16.29■□□□□ 0.2
CDT1-202ENST00000562747 ZW10O43264 779 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms