RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 ADCY2Q08462 1091 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 ABHD18Q0P651 414 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 WASHC5Q12768 1159 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 CDC20Q12834 499 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 PRKD1Q15139 912 aaPredicted RBP11.44□□□□□ -0.58
USP3-220ENST00000561381 SKIDA1Q1XH10 827 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 ATP13A5Q4VNC0 1218 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 LRRC38Q5VT99 294 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 KAZNQ674X7 775 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 PDPK2PQ6A1A2 396 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 C11orf96Q7Z7L8 435 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 RHOT2Q8IXI1 618 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 AVL9Q8NBF6 648 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 STARD8Q92502 1023 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 RSC1A1Q92681 617 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 ELMO2Q96JJ3 720 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 TEKT5Q96M29 485 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 CCDC42Q96M95 316 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 ZPBPQ9BS86 351 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 TIMM29Q9BSF4 260 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 ULBP3Q9BZM4 244 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 ZNF71Q9NQZ8 489 aaPredicted RBP11.44□□□□□ -0.58
USP3-220ENST00000561381 RAD18Q9NS91 495 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 ZNHIT6Q9NWK9 470 aaKnown RBP11.44□□□□□ -0.58
USP3-220ENST00000561381 WDR37Q9Y2I8 494 aa11.44□□□□□ -0.58
USP3-220ENST00000561381 LOC285095A0A1B0GVY8 99 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 VEGFDO43915 354 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 UGT1A9O60656 530 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 MFAP3LO75121 409 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 UGT1A6P19224 532 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 NFKB1P19838 968 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 UGT1A1P22309 533 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 UGT1A4P22310 534 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 STAT5AP42229 794 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 CDKN2BP42772 138 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 WNT3AP56704 352 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 PPP1CAP62136 330 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 TMEM115Q12893 351 aaPredicted RBP11.43□□□□□ -0.58
USP3-220ENST00000561381 TRIM14Q14142 442 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 GPR18Q14330 331 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 SLC14A2Q15849 920 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 DEFB109BQ30KR1 87 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 ODF2Q5BJF6 829 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 COLEC12Q5KU26 742 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 CCDC70Q6NSX1 233 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 C16orf46Q6P387 395 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 KDELC1Q6UW63 502 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 ABRAXAS1Q6UWZ7 409 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 FAM92BQ6ZTR7 304 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 TRAPPC5Q8IUR0 188 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 VSTM4Q8IW00 320 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 RHOT1Q8IXI2 618 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 TTC30BQ8N4P2 665 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 SLC25A41Q8N5S1 370 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 COL26A1Q96A83 441 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 CATSPER2Q96P56 530 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 VPS35Q96QK1 796 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 OR6C1Q96RD1 312 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 GOLPH3Q9H4A6 298 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 ZNF768Q9H5H4 540 aaKnown RBP11.43□□□□□ -0.58
USP3-220ENST00000561381 UGT1A7Q9HAW7 530 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 UGT1A10Q9HAW8 530 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 UGT1A8Q9HAW9 530 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 SLC40A1Q9NP59 571 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 IL26Q9NPH9 171 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 POT1Q9NUX5 634 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 FAM153AQ9UHL3 310 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 RPS6KL1Q9Y6S9 549 aa11.43□□□□□ -0.58
USP3-220ENST00000561381 ZNF106Q9H2Y7 1883 aaKnown RBP11.42□□□□□ -0.58
USP3-220ENST00000561381 BUD23O43709 281 aaKnown RBP11.42□□□□□ -0.58
USP3-220ENST00000561381 SPOPO43791 374 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 CST8O60676 142 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 RASSF9O75901 435 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 IDSP22304 550 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 HMGCLP35914 325 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 SLC1A1P43005 524 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 CTSCP53634 463 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 CHRNA6Q15825 494 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 TAZQ16635 292 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 SIRPB2Q5JXA9 342 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 CACHD1Q5VU97 1274 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 IRGCQ6NXR0 463 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 FAM151BQ6UXP7 276 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 WASH2PQ6VEQ5 465 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 FAM83HQ6ZRV2 1179 aaPredicted RBP11.42□□□□□ -0.58
USP3-220ENST00000561381 ZC3H18Q86VM9 953 aaKnown RBP11.42□□□□□ -0.58
USP3-220ENST00000561381 ESX1Q8N693 406 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 RASGEF1AQ8N9B8 481 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 GALNT6Q8NCL4 622 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 GPR150Q8NGU9 434 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 GDAP1Q8TB36 358 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 NAT14Q8WUY8 206 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 TFB1MQ8WVM0 346 aaKnown RBP11.42□□□□□ -0.58
USP3-220ENST00000561381 HAUS1Q96CS2 278 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 CXorf40BQ96DE9 158 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 OXNAD1Q96HP4 312 aaPredicted RBP11.42□□□□□ -0.58
USP3-220ENST00000561381 EPN3Q9H201 632 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 TRIT1Q9H3H1 467 aaKnown RBP11.42□□□□□ -0.58
USP3-220ENST00000561381 WASH6PQ9NQA3 447 aa11.42□□□□□ -0.58
USP3-220ENST00000561381 DDX56Q9NY93 547 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms