RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 GOLGA8MH3BSY2 632 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 NUDT21O43809 227 aaKnown RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 CSO75390 466 aaKnown RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 GOT2P00505 430 aaKnown RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 RPLP0P05388 317 aaKnown RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 GPR89BP0CG08 455 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 MSH3P20585 1137 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 ITGALP20701 1170 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 ACRV1P26436 265 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 ARNTP27540 789 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 RPL10P27635 214 aaKnown RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 PBLDP30039 288 aaPredicted RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 AKT1P31749 480 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 DRG2P55039 364 aaKnown RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 ETF1P62495 437 aaKnown RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 NFE2L1Q14494 772 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 CLCA4Q14CN2 919 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 SEPT7Q16181 437 aaKnown RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 INSCQ1MX18 579 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 ZNF658BQ4V348 819 aaPredicted RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 LRRC8BQ6P9F7 803 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 TAS2R42Q7RTR8 314 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 SPRED1Q7Z699 444 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 LDB1Q86U70 411 aaPredicted RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 CCNJLQ8IV13 435 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 CLDN19Q8N6F1 224 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 NAT8LQ8N9F0 302 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 NAT6Q93015 286 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 LRRC45Q96CN5 670 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 TIMM29Q9BSF4 260 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 ABCG4Q9H172 646 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 LRRN3Q9H3W5 708 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 TREX1Q9NSU2 369 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 MARCH4Q9P2E8 410 aaPredicted RBP13.67□□□□□ -0.22
TPM1-230ENST00000561266 PCYOX1Q9UHG3 505 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 ENTPD2Q9Y5L3 495 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 SLC30A1Q9Y6M5 507 aa13.67□□□□□ -0.22
TPM1-230ENST00000561266 TAF4O00268 1085 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 OR1I1O60431 355 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 F7P08709 466 aaPredicted RBP13.66□□□□□ -0.22
TPM1-230ENST00000561266 CDK4P11802 303 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 F3P13726 295 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 CD1CP29017 333 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 SLC19A1P41440 591 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 NPY2RP49146 381 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 UBE2IP63279 158 aaKnown RBP13.66□□□□□ -0.22
TPM1-230ENST00000561266 CACNG1Q06432 222 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 GTF2H3Q13889 308 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 NR1D2Q14995 579 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 SKIDA1Q1XH10 827 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 ISXQ2M1V0 245 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 GPR33Q49SQ1 333 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 PCID2Q5JVF3 399 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 RNASEH2BQ5TBB1 312 aaKnown RBP13.66□□□□□ -0.22
TPM1-230ENST00000561266 NKAIN2Q5VXU1 208 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 UNQ6494/PRO21346Q6UXR6 183 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 ZNF574Q6ZN55 896 aaPredicted RBP13.66□□□□□ -0.22
TPM1-230ENST00000561266 MDM1Q8TC05 714 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 SLCO2A1Q92959 643 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 MFSD3Q96ES6 412 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 TRIM51Q9BSJ1 452 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 SYNDIG1Q9H7V2 258 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 ZDHHC3Q9NYG2 299 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 FAM8A1Q9UBU6 413 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 RIMKLBQ9ULI2 386 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 CELSR3Q9NYQ7 3312 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 DMXL2Q8TDJ6 3036 aa13.66□□□□□ -0.22
TPM1-230ENST00000561266 GOLGA6L10A0A0M3HER8 536 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 OR52A4PA6NMU1 304 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 AGRPO00253 132 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 TP73O15350 636 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 BANF1O75531 89 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 ATP1B2P14415 290 aaPredicted RBP13.65□□□□□ -0.22
TPM1-230ENST00000561266 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
TPM1-230ENST00000561266 PNLIPP16233 465 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 ALDH4A1P30038 563 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 CSF2RBP32927 897 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 FASLGP48023 281 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 CDK16Q00536 496 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 DMPKQ09013 629 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 PTK6Q13882 451 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 AMZ1Q400G9 498 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 BCL7AQ4VC05 210 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 ABRAXAS1Q6UWZ7 409 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 NAPRTQ6XQN6 538 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 USP53Q70EK8 1073 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 SPNS2Q8IVW8 549 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 CACTIN-AS1Q8N1I8 211 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 MCUQ8NE86 351 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 PPHLN1Q8NEY8 458 aaKnown RBP13.65□□□□□ -0.22
TPM1-230ENST00000561266 SPDYE1Q8NFV5 336 aaPredicted RBP13.65□□□□□ -0.22
TPM1-230ENST00000561266 ULK4Q96C45 1275 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 ATXN7L3BQ96GX2 97 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 PWWP2AQ96N64 755 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 TTC25Q96NG3 672 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 FCRL3Q96P31 734 aaPredicted RBP13.65□□□□□ -0.22
TPM1-230ENST00000561266 SERPINB12Q96P63 405 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 COPS8Q99627 209 aa13.65□□□□□ -0.22
TPM1-230ENST00000561266 NUDT22Q9BRQ3 303 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms