RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 AMD1P17707 334 aa15.94■□□□□ 0.14
SNX1-213ENST00000561026 VCLP18206 1134 aa15.94■□□□□ 0.14
SNX1-213ENST00000561026 DRG2P55039 364 aaKnown RBP15.94■□□□□ 0.14
SNX1-213ENST00000561026 GTF2H3Q13889 308 aa15.94■□□□□ 0.14
SNX1-213ENST00000561026 SLC1A5Q15758 541 aa15.94■□□□□ 0.14
SNX1-213ENST00000561026 TRAPPC5Q8IUR0 188 aa15.94■□□□□ 0.14
SNX1-213ENST00000561026 KIAA1143Q96AT1 154 aaPredicted RBP15.94■□□□□ 0.14
SNX1-213ENST00000561026 TTC25Q96NG3 672 aa15.94■□□□□ 0.14
SNX1-213ENST00000561026 TRIT1Q9H3H1 467 aaKnown RBP15.94■□□□□ 0.14
SNX1-213ENST00000561026 GPN2Q9H9Y4 310 aaPredicted RBP15.94■□□□□ 0.14
SNX1-213ENST00000561026 TRHDEQ9UKU6 1024 aa15.94■□□□□ 0.14
SNX1-213ENST00000561026 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.94■□□□□ 0.14
SNX1-213ENST00000561026 PCDHA13Q9Y5I0 950 aa15.94■□□□□ 0.14
SNX1-213ENST00000561026 ZNF891A8MT65 544 aaPredicted RBP15.93■□□□□ 0.14
SNX1-213ENST00000561026 HACD1B0YJ81 288 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 F5H423 210 aaPredicted RBP15.93■□□□□ 0.14
SNX1-213ENST00000561026 PYCARD-AS1I3L0S3 204 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 UGT1A9O60656 530 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 KCNJ13O60928 360 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 UGT1A6P19224 532 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 HLA-DPA1P20036 260 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 UGT1A1P22309 533 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 UGT1A4P22310 534 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 SPAM1P38567 509 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 MARCKSL1P49006 195 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 ABHD18Q0P651 414 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 MPP3Q13368 585 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 CHRNA6Q15825 494 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 SARM1Q6SZW1 724 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 CCDC50Q8IVM0 306 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 RBM12BQ8IXT5 1001 aaKnown RBP15.93■□□□□ 0.14
SNX1-213ENST00000561026 UNC5BQ8IZJ1 945 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 IPMKQ8NFU5 416 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 BLOC1S5Q8TDH9 187 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 KRT35Q92764 455 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 HAUS1Q96CS2 278 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 RBM41Q96IZ5 413 aaKnown RBP15.93■□□□□ 0.14
SNX1-213ENST00000561026 TGM7Q96PF1 710 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 QKIQ96PU8 341 aaKnown RBP eCLIP15.93■□□□□ 0.146e-10■■□□□ 13.4
SNX1-213ENST00000561026 EFHD1Q9BUP0 239 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 SLC25A18Q9H1K4 315 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 ADNPQ9H2P0 1102 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 UGT1A7Q9HAW7 530 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 UGT1A10Q9HAW8 530 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 UGT1A8Q9HAW9 530 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 TRIM10Q9UDY6 481 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 TFR2Q9UP52 801 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 WDR37Q9Y2I8 494 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 MYO18BQ8IUG5 2567 aa15.93■□□□□ 0.14
SNX1-213ENST00000561026 GLYATL1P3A0A0U1RQE8 302 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 LOC101059948A0A1B0GTJ6 334 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 NKX2-8O15522 239 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 PPFIA2O75334 1257 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 DLGAP3O95886 979 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 LEPRP48357 1165 aaKnown RBP15.92■□□□□ 0.14
SNX1-213ENST00000561026 NFKB2Q00653 900 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 FOXM1Q08050 763 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 XRCC4Q13426 336 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 GPR18Q14330 331 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 SPA17Q15506 151 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 PPP2R5EQ16537 467 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 LDLRAP1Q5SW96 308 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 C11orf63Q6NUN7 778 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 FAM151BQ6UXP7 276 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 BBS12Q6ZW61 710 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 GLT6D1Q7Z4J2 308 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 AMZ2Q86W34 360 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 CCDC170Q8IYT3 715 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 RASGEF1AQ8N9B8 481 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 CXorf40BQ96DE9 158 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 CATSPER2Q96P56 530 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 HEMGNQ9BXL5 484 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 TRIM5Q9C035 493 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 ZCCHC2Q9C0B9 1178 aaKnown RBP15.92■□□□□ 0.14
SNX1-213ENST00000561026 ZNF768Q9H5H4 540 aaKnown RBP15.92■□□□□ 0.14
SNX1-213ENST00000561026 RSPH14Q9UHP6 348 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 PKP3Q9Y446 797 aa15.92■□□□□ 0.14
SNX1-213ENST00000561026 APOC4-APOC2K7ER74 178 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 GAPDHSO14556 408 aaPredicted RBP15.91■□□□□ 0.14
SNX1-213ENST00000561026 GPR39O43194 453 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 SUV39H1O43463 412 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 BUD23O43709 281 aaKnown RBP15.91■□□□□ 0.14
SNX1-213ENST00000561026 POP7O75817 140 aaKnown RBP15.91■□□□□ 0.14
SNX1-213ENST00000561026 WISP1O95388 367 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 APOC2P02655 101 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 CA5AP35218 305 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 HALP42357 657 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 CAPZBP47756 277 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 SEPHS1P49903 392 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 CTSCP53634 463 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 POLE2P56282 527 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 KCNC4Q03721 635 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 DMPKQ09013 629 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 MAP7Q14244 749 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 IL11RAQ14626 422 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 ATG14Q6ZNE5 492 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 DAAM2Q86T65 1068 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 ESX1Q8N693 406 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 DDHD1Q8NEL9 900 aa15.91■□□□□ 0.14
SNX1-213ENST00000561026 RSC1A1Q92681 617 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms