RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 TISP43B9A030 160 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 E9PMD0 336 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 LMO7DNF2Z398 122 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 TEX33O43247 280 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 NEMFO60524 1076 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 DNAJB5O75953 348 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 BEST1O76090 585 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 GPANK1O95872 356 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 AMY1AP04745 511 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 ATP5BP06576 529 aaKnown RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 OR52Z1P0C646 297 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 RAP2AP10114 183 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 TCN2P20062 427 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 MUTP22033 750 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 CORO1AP31146 461 aaKnown RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 CD70P32970 193 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 GNL1P36915 607 aaPredicted RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 GPR3P46089 330 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 PSMD8P48556 350 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 LIG4P49917 911 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 GYS2P54840 703 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 ADKP55263 362 aaKnown RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 EVCP57679 992 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 HSD11B2P80365 405 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 RBP5P82980 135 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 TFAMQ00059 246 aaKnown RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 GOLGA8FQ08AF8 430 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 GOLGA8DPQ0D2H9 430 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 EIF2B5Q13144 721 aaKnown RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 ART3Q13508 389 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 C1orf61Q13536 156 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 PTK2BQ14289 1009 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 KIF26BQ2KJY2 2108 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 SETMARQ53H47 684 aaPredicted RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 OR6B2Q6IFH4 312 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 JMJD6Q6NYC1 403 aaPredicted RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 LINGO4Q6UY18 593 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 SCD5Q86SK9 330 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 TMEM135Q86UB9 458 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 TGIF2LYQ8IUE0 185 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 DENND1CQ8IV53 801 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 STK40Q8N2I9 435 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 FBXL16Q8N461 479 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 WFDC5Q8TCV5 224 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 WFIKKN2Q8TEU8 576 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 STARD8Q92502 1023 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 HDAC11Q96DB2 347 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 RNF31Q96EP0 1072 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 CYFIP2Q96F07 1278 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 SPATA5L1Q9BVQ7 753 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 AGXT2Q9BYV1 514 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 SLC29A3Q9BZD2 475 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 ELOVL4Q9GZR5 314 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 GPN2Q9H9Y4 310 aaPredicted RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 DMRT3Q9NQL9 472 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 TLR8Q9NR97 1041 aaKnown RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 ASF1BQ9NVP2 202 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.81□□□□□ -1.8
HERC1-211ENST00000560983 LUZP4Q9P127 313 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 ORC3Q9UBD5 711 aaPredicted RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 TESQ9UGI8 421 aaKnown RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 USP25Q9UHP3 1055 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 SLCO3A1Q9UIG8 710 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 GGA2Q9UJY4 613 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 AJAP1Q9UKB5 411 aaPredicted RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 INTS6Q9UL03 887 aaKnown RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 NAALADL1Q9UQQ1 740 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 KLF2Q9Y5W3 355 aaPredicted RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 MRPS18BQ9Y676 258 aaKnown RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 STYXL1Q9Y6J8 313 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 PRRC2CQ9Y520 2896 aaKnown RBP3.81□□□□□ -1.8
HERC1-211ENST00000560983 PLXNA2O75051 1894 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 CSPG4Q6UVK1 2322 aa3.81□□□□□ -1.8
HERC1-211ENST00000560983 ZNF638Q14966 1978 aaKnown RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 LRRC3CA6NJW4 275 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 CGB1A6NKQ9 187 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 HNRNPDLO14979 420 aaKnown RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 RAD51BO15315 384 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 SLC7A4O43246 635 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 GRID2O43424 1007 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 PROM1O43490 865 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 B4GAT1O43505 415 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 RFPL1O75677 317 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 IL1BP01584 269 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 IGHDP01880 384 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 HMBSP08397 361 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 TSHRP16473 764 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 POLR2EP19388 210 aaKnown RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 KLK2P20151 261 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 HNRNPA2B1P22626 353 aaKnown RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 SGSHP51688 502 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 ART1P52961 327 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 PMS2P54278 862 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 MRPS35P82673 323 aaKnown RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 COG7P83436 770 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 MC1RQ01726 317 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 CNTN1Q12860 1018 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 ZNF630Q2M218 657 aaPredicted RBP3.8□□□□□ -1.8
HERC1-211ENST00000560983 C14orf28Q4W4Y0 310 aa3.8□□□□□ -1.8
HERC1-211ENST00000560983 MPPE1Q53F39 396 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms