RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	KIF1C	O43896	1103 aa	Known RBP	13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	AKR1B10	O60218	316 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	MTX2	O75431	263 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	PRKAR1A	P10644	381 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	NELFE	P18615	380 aa	Known RBP	13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	CD68	P34810	354 aa	Predicted RBP	13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	SLC1A1	P43005	524 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	FOXK1	P85037	733 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	DMPK	Q09013	629 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	WASHC5	Q12768	1159 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	GPR18	Q14330	331 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	DEFB109B	Q30KR1	87 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	ZDHHC20	Q5W0Z9	365 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	KDELC1	Q6UW63	502 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	MFSD7	Q6UXD7	560 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	B4GALNT4	Q76KP1	1039 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	BZW1	Q7L1Q6	419 aa	Known RBP	13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	TRIM48	Q8IWZ4	208 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	TTC30B	Q8N4P2	665 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	ZDHHC12	Q96GR4	267 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	TGM7	Q96PF1	710 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	FCRL4	Q96PJ5	515 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	BPIFA1	Q9NP55	256 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	DDX56	Q9NY93	547 aa	Known RBP	13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	IL17C	Q9P0M4	197 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	SAE1	Q9UBE0	346 aa	Predicted RBP	13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	FAM153A	Q9UHL3	310 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	WDR37	Q9Y2I8	494 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	KCTD3	Q9Y597	815 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	PCDHB3	Q9Y5E6	796 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	PCDHGA6	Q9Y5G7	932 aa		13.4	□□□□□ -0.26
RNF31-223	ENST00000560754	TEX15	Q9BXT5	2789 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	SPTB	P11277	2137 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	CLEC18A	A5D8T8	446 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	OR52A4P	A6NMU1	304 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	PMPCB	O75439	489 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	SPAG6	O75602	509 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	TPM3	P06753	285 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	VCL	P18206	1134 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	FECH	P22830	423 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	DLST	P36957	453 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	CDKN2B	P42772	138 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	CAPZB	P47756	277 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	SEPHS1	P49903	392 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	DRG2	P55039	364 aa	Known RBP	13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	TRIM14	Q14142	442 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	CACHD1	Q5VU97	1274 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	CLEC18B	Q6UXF7	455 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	BPHL	Q86WA6	291 aa	Predicted RBP	13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	RFX6	Q8HWS3	928 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	RHOT1	Q8IXI2	618 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	CLEC18C	Q8NCF0	446 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	GALNT6	Q8NCL4	622 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	RSC1A1	Q92681	617 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	DEF6	Q9H4E7	631 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	UBP1	Q9NZI7	540 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	KCND3	Q9UK17	655 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	PADI1	Q9ULC6	663 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	INTU	Q9ULD6	942 aa		13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	MRPS18B	Q9Y676	258 aa	Known RBP	13.39	□□□□□ -0.27
RNF31-223	ENST00000560754	SPTAN1	Q13813	2472 aa	Known RBP	13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	PDZK1P1	A8MUH7	402 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	MTSS1	O43312	755 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	UGT1A9	O60656	530 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	POP7	O75817	140 aa	Known RBP	13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	KIAA0754	O94854	1291 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	NDUFA10	O95299	355 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	FURIN	P09958	794 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	CCNYL3	P0C7X3	344 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	UGT1A6	P19224	532 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	UGT1A1	P22309	533 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	UGT1A4	P22310	534 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	NOP2	P46087	812 aa	Known RBP	13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	WNT3A	P56704	352 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	UBAP2L	Q14157	1087 aa	Known RBP	13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	TFDP2	Q14188	446 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	SEPT7	Q16181	437 aa	Known RBP	13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	IGFBP7	Q16270	282 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	PLA2G4E	Q3MJ16	856 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	SIRPB2	Q5JXA9	342 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	ATP1A1-AS1	Q5TC04	95 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	METRNL	Q641Q3	311 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	TCTN3	Q6NUS6	607 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	C16orf46	Q6P387	395 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	AMZ2	Q86W34	360 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	RASGEF1A	Q8N9B8	481 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	TFB1M	Q8WVM0	346 aa	Known RBP	13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	ZFPM2	Q8WW38	1151 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	CXorf40B	Q96DE9	158 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	SLC41A2	Q96JW4	573 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	MRGPRX2	Q96LB1	330 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	CCDC42	Q96M95	316 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	TTC25	Q96NG3	672 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	FCRL5	Q96RD9	977 aa		13.38	□□□□□ -0.27
RNF31-223	ENST00000560754	UGT1A7	Q9HAW7	530 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms