RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 CFAP99D6REC4 459 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 PLD2O14939 933 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 TLX3O43711 291 aaPredicted RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 DUX1O43812 170 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 HGFP14210 728 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 MPSTP25325 297 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 CD1CP29017 333 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 CCKBRP32239 447 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 CA5AP35218 305 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 RPL22P35268 128 aaKnown RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 CLCNKAP51800 687 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 CTSCP53634 463 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 TERF1P54274 439 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 PCBP4P57723 403 aaKnown RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 GPLD1P80108 840 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 CCDC173Q0VFZ6 552 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 EIF3IQ13347 325 aaKnown RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 MSLNQ13421 630 aaPredicted RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 NR1D2Q14995 579 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 SIX1Q15475 284 aaPredicted RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 SKIDA1Q1XH10 827 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 SNAP47Q5SQN1 464 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 C4orf22Q6V702 233 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 TMPRSS9Q7Z410 1059 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 SNX20Q7Z614 316 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 KLHDC8BQ8IXV7 354 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 BEND7Q8N7W2 519 aaPredicted RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 GLIS1Q8NBF1 620 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 RCBTB1Q8NDN9 531 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 STYXQ8WUJ0 223 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 NAT14Q8WUY8 206 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 NCSTNQ92542 709 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 SGF29Q96ES7 293 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZNF514Q96K75 400 aaPredicted RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 PBKQ96KB5 322 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZNF578Q96N58 590 aaPredicted RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 COPS8Q99627 209 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 KCNF1Q9H3M0 494 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 NLE1Q9NVX2 485 aaPredicted RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 SMOXQ9NWM0 555 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 PISDQ9UG56 409 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 PSMD13Q9UNM6 376 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 DRG1Q9Y295 367 aaKnown RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 LOXL2Q9Y4K0 774 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 PCDHGA8Q9Y5G5 932 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 COL27A1Q8IZC6 1860 aaPredicted RBP12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 CACNA1BQ00975 2339 aa12.76□□□□□ -0.37
CTDSPL2-209ENST00000560620 A6NCN8 305 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 OR52A4PA6NMU1 304 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 EIF2S3P41091 472 aaKnown RBP12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 ABCG1P45844 678 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 MAPK10P53779 464 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 ERVPABLB-1P60509 514 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 XIAPP98170 497 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 SEMA5AQ13591 1074 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 LAMB3Q13751 1172 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 TRIP13Q15645 432 aaPredicted RBP12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 GPR33Q49SQ1 333 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 DRICH1Q6PGQ1 229 aaPredicted RBP12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 C11orf96Q7Z7L8 435 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 REXO1L1PQ8IX06 675 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 NXPE1Q8N323 547 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 SLC35F6Q8N357 371 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZNF248Q8NDW4 579 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 MS4A14Q96JA4 679 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 CCDC74BQ96LY2 380 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 SLC46A1Q96NT5 459 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 NAP1L3Q99457 506 aaPredicted RBP12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 AP1M1Q9BXS5 423 aa12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZNF106Q9H2Y7 1883 aaKnown RBP12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 SCHIP1Q9P0W5 487 aaPredicted RBP12.75□□□□□ -0.37
CTDSPL2-209ENST00000560620 KIF26BQ2KJY2 2108 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 IGHV5-10-1A0A0J9YXX1 117 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 A0A1W2PNU3 283 aaPredicted RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 HEATR9A2RTY3 570 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 A8MU76 341 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 KCNJ13O60928 360 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 DXOO77932 396 aaKnown RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 ATP1B2P14415 290 aaPredicted RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 AMD1P17707 334 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 XRCC1P18887 633 aaPredicted RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 ITIH1P19827 911 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 CSTF2P33240 577 aaKnown RBP eCLIP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 SLC19A1P41440 591 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 GRIA1P42261 906 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 VPS41P49754 854 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 CDKN1CP49918 316 aaPredicted RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 SESN2P58004 480 aaPredicted RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 ZFP36L1Q07352 338 aaKnown RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 NFE2L1Q14494 772 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 GSE1Q14687 1217 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 CLPPQ16740 277 aaPredicted RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 KCTD19Q17RG1 926 aaPredicted RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 SERPINA9Q86WD7 417 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 SLITRK4Q8IW52 837 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 OR4D9Q8NGE8 314 aa12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 SNIP1Q8TAD8 396 aaKnown RBP12.74□□□□□ -0.37
CTDSPL2-209ENST00000560620 HEXDCQ8WVB3 486 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms