RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CIR1Q86X95 450 aaPredicted RBP6.31□□□□□ -1.4
HERC1-208ENST00000560462 LRRC75A-AS1Q8N1F1 130 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 ANKRD20A12PQ8NF67 263 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 OR2W6PQ8NHA6 318 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 SLC37A2Q8TED4 501 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 SYAP1Q96A49 352 aaPredicted RBP6.31□□□□□ -1.4
HERC1-208ENST00000560462 FUBP1Q96AE4 644 aaKnown RBP6.31□□□□□ -1.4
HERC1-208ENST00000560462 FIZ1Q96SL8 496 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 DPH2Q9BQC3 489 aaPredicted RBP6.31□□□□□ -1.4
HERC1-208ENST00000560462 HEPHQ9BQS7 1158 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 DUSP16Q9BY84 665 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 RAB34Q9BZG1 259 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 SDCBP2Q9H190 292 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 XYLT2Q9H1B5 865 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 EPB41L1Q9H4G0 881 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 ZSCAN16Q9H4T2 348 aaPredicted RBP6.31□□□□□ -1.4
HERC1-208ENST00000560462 ARNT2Q9HBZ2 717 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 DMRT3Q9NQL9 472 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 TRNAU1APQ9NX07 287 aaKnown RBP6.31□□□□□ -1.4
HERC1-208ENST00000560462 P4HTMQ9NXG6 502 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 CGGBP1Q9UFW8 167 aaPredicted RBP6.31□□□□□ -1.4
HERC1-208ENST00000560462 COQ6Q9Y2Z9 468 aa6.31□□□□□ -1.4
HERC1-208ENST00000560462 CHD5Q8TDI0 1954 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 TRBV23OR9-2A0A075B6M9 112 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 TRIM49BA6NDI0 452 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 GOLGA6CA6NDK9 693 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 GOLGA6BA6NDN3 693 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 TCAF2A6NFQ2 919 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 ADAM10O14672 748 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 DDX3YO15523 660 aaKnown RBP6.3□□□□□ -1.4
HERC1-208ENST00000560462 HTRA2O43464 458 aaPredicted RBP6.3□□□□□ -1.4
HERC1-208ENST00000560462 TLX2O43763 284 aaPredicted RBP6.3□□□□□ -1.4
HERC1-208ENST00000560462 SMPD2O60906 423 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 LRIG2O94898 1065 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 RASAL1O95294 804 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 MOCS2O96007 188 aaPredicted RBP6.3□□□□□ -1.4
HERC1-208ENST00000560462 GOLGA6DP0CG33 693 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 SNRPBP14678 240 aaKnown RBP6.3□□□□□ -1.4
HERC1-208ENST00000560462 ACTR1BP42025 376 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 TKTL1P51854 596 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 CCNHP51946 323 aaPredicted RBP6.3□□□□□ -1.4
HERC1-208ENST00000560462 GSDMDP57764 484 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 ACTR1AP61163 376 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 HHEXQ03014 270 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 AIMP2Q13155 320 aaKnown RBP6.3□□□□□ -1.4
HERC1-208ENST00000560462 ZNF460Q14592 562 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 ZNF805Q5CZA5 627 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 RAB41Q5JT25 222 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.3□□□□□ -1.4
HERC1-208ENST00000560462 RAP1GAP2Q684P5 730 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 PM20D1Q6GTS8 502 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 LCN10Q6JVE6 187 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 LHFPL2Q6ZUX7 228 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 BHLHA9Q7RTU4 235 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 TTC7BQ86TV6 843 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 ZBTB46Q86UZ6 589 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 UNC93AQ86WB7 457 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 CHSY1Q86X52 802 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 SFRP1Q8N474 314 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 IGSF22Q8N9C0 903 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 KREMEN1Q96MU8 473 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 TGM7Q96PF1 710 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 MLPHQ9BV36 600 aaPredicted RBP6.3□□□□□ -1.4
HERC1-208ENST00000560462 LGR4Q9BXB1 951 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 ASPNQ9BXN1 380 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 ULBP1Q9BZM6 244 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 ST6GALNAC4Q9H4F1 302 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 STN1Q9H668 368 aaKnown RBP6.3□□□□□ -1.4
HERC1-208ENST00000560462 YAE1D1Q9NRH1 226 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 ABCC13Q9NSE7 274 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 GOLGA6AQ9NYA3 693 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 GMPR2Q9P2T1 348 aaKnown RBP6.3□□□□□ -1.4
HERC1-208ENST00000560462 EXOC7Q9UPT5 735 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 OR51B4Q9Y5P0 310 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 COMMD10Q9Y6G5 202 aa6.3□□□□□ -1.4
HERC1-208ENST00000560462 TRAV17A0A0B4J275 112 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 AQP7O14520 342 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 LCE2BO14633 110 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 EIF3DO15371 548 aaKnown RBP eCLIP6.29□□□□□ -1.4
HERC1-208ENST00000560462 SNAP91O60641 907 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 TBCAO75347 108 aaKnown RBP6.29□□□□□ -1.4
HERC1-208ENST00000560462 SCRG1O75711 98 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 CNOT4O95628 575 aaKnown RBP6.29□□□□□ -1.4
HERC1-208ENST00000560462 ABOP16442 354 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 TNNI1P19237 187 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 TACR2P21452 398 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 THBS2P35442 1172 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 KIR2DL3P43628 341 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 SCNN1BP51168 640 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 DNA2P51530 1060 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 EVCP57679 992 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 ARG2P78540 354 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 FAPQ12884 760 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 SSPNQ14714 243 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 ZNF699Q32M78 642 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 FAM174BQ3ZCQ3 159 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 ZNF667Q5HYK9 610 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 SLC35F1Q5T1Q4 408 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 TTC22Q5TAA0 569 aa6.29□□□□□ -1.4
HERC1-208ENST00000560462 GTF2IRD2BQ6EKJ0 949 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms