RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TCF12Q99081 682 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 PLLPQ9Y342 182 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 BRWD1Q9NSI6 2320 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 CDK5RAP2Q96SN8 1893 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 ESRP1Q6NXG1 681 aaKnown RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 CLVS1Q8IUQ0 354 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 MMAAQ8IVH4 418 aaKnown RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 OR10H5Q8NGA6 315 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 POLE3Q9NRF9 147 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 PTGFRNQ9P2B2 879 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 ATXN2Q99700 1313 aaKnown RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 PI15O43692 258 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 NRP2O60462 931 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 CLUP10909 449 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 CSKP41240 450 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 NRG1Q02297 640 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 DGUOKQ16854 277 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 ZSWIM7Q19AV6 140 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 SIPA1Q96FS4 1042 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 JSRP1Q96MG2 331 aaPredicted RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 DNAJC28Q9NX36 388 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 SIRPGQ9P1W8 387 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 IL36AQ9UHA7 158 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 WNT9AO14904 365 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 C8GP07360 202 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 CELF5Q8N6W0 485 aaKnown RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 PNPT1Q8TCS8 783 aaKnown RBP13.34□□□□□ -0.27
TRAF3-208ENST00000560371 PPM1MQ96MI6 270 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 KCNS3Q9BQ31 491 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 ERVK-5Q9HDB9 667 aa13.34□□□□□ -0.27
TRAF3-208ENST00000560371 FAM86C2PA6NEL3 165 aa13.33□□□□□ -0.27
TRAF3-208ENST00000560371 MAGEB3O15480 346 aa13.33□□□□□ -0.27
TRAF3-208ENST00000560371 NOL4O94818 638 aa13.33□□□□□ -0.27
TRAF3-208ENST00000560371 TOP3AQ13472 1001 aaPredicted RBP13.33□□□□□ -0.27
TRAF3-208ENST00000560371 NPLOC4Q8TAT6 608 aa13.33□□□□□ -0.27
TRAF3-208ENST00000560371 ZCCHC10Q8TBK6 192 aa13.33□□□□□ -0.27
TRAF3-208ENST00000560371 LPIN3Q9BQK8 851 aa13.33□□□□□ -0.27
TRAF3-208ENST00000560371 PACSIN3Q9UKS6 424 aa13.33□□□□□ -0.27
TRAF3-208ENST00000560371 TRIM38O00635 465 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 GJA1P17302 382 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 POU5F1Q01860 360 aaKnown RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 CYP4F3Q08477 520 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 ZNF155Q12901 538 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 ACAP2Q15057 778 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 SOWAHAQ2M3V2 549 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 GDPD4Q6W3E5 623 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 DCBLD1Q8N8Z6 715 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 CYB5D2Q8WUJ1 264 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 R3HDM2Q9Y2K5 976 aaKnown RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 A0A1W2PPM1 405 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 H7C0S8 307 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 PFKMP08237 780 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 FOSL2P15408 326 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 ALOX12P18054 663 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 CACNA2D1P54289 1103 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 C1QTNF8P60827 252 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 GTF2H2Q13888 395 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 TAF1AQ15573 450 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 RNF43Q68DV7 783 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 GTF2H2CQ6P1K8 395 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 ENPP7Q6UWV6 458 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 TRABD2AQ86V40 505 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 PRICKLE1Q96MT3 831 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 FBXW2Q9UKT8 454 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 TIMM22Q9Y584 194 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 DHPSP49366 369 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 PLEKHG4Q58EX7 1191 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 SULT1C3Q6IMI6 304 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 KLHL17Q6TDP4 642 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 MREGQ8N565 214 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 FAM98AQ8NCA5 519 aaKnown RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 NEK7Q8TDX7 302 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 DCUN1D5Q9BTE7 237 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 CRISPLD1Q9H336 500 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 SAMD4AQ9UPU9 718 aaKnown RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 TPRP12270 2363 aaKnown RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 ZNF142P52746 1687 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 SCN11AQ9UI33 1791 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 SNAP91O60641 907 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 ANXA4P09525 319 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 HOXC12P31275 282 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 SLC7A2P52569 658 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 GRB14Q14449 540 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 NET1Q7Z628 596 aaPredicted RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 MYDGFQ969H8 173 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 NR2E1Q9Y466 385 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 CCL22O00626 93 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 BPGMP07738 259 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 RFC2P35250 354 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 ZBTB6Q15916 424 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 FAM46DQ8NEK8 389 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 TMEM175Q9BSA9 504 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 TMEM27Q9HBJ8 222 aa13.33□□□□□ -0.28
TRAF3-208ENST00000560371 MRPS7Q9Y2R9 242 aaKnown RBP13.33□□□□□ -0.28
TRAF3-208ENST00000560371 CACNA1CQ13936 2221 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 DHX15O43143 795 aaKnown RBP13.32□□□□□ -0.28
TRAF3-208ENST00000560371 FGF18O76093 207 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 UBXN7O94888 489 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 ESR1P03372 595 aa13.32□□□□□ -0.28
TRAF3-208ENST00000560371 AVPR1BP47901 424 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms