RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 PCDHGA7Q9Y5G6 932 aa13□□□□□ -0.33
SMAD3-213ENST00000560175 AHCTF1Q8WYP5 2266 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 TRBV23OR9-2A0A075B6M9 112 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 IGHV5-10-1A0A0J9YXX1 117 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 PMS2P1A4D2B8 440 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 LILRA5A6NI73 299 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 PLD2O14939 933 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 POP7O75817 140 aaKnown RBP12.99□□□□□ -0.33
SMAD3-213ENST00000560175 ITGA2BP08514 1039 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 HOXB3P14651 431 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-213ENST00000560175 ETS1P14921 441 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 TPH1P17752 444 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 IDSP22304 550 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 RPL22P35268 128 aaKnown RBP12.99□□□□□ -0.33
SMAD3-213ENST00000560175 ACVR1Q04771 509 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 CDH17Q12864 832 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 SNX1Q13596 522 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 BCL7AQ4VC05 210 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 C3orf38Q5JPI3 329 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 METRNLQ641Q3 311 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 TMEM71Q6P5X7 295 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 TMEM220Q6QAJ8 160 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 WDR74Q6RFH5 385 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-213ENST00000560175 CRTC3Q6UUV7 619 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 USP53Q70EK8 1073 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 AMZ2Q86W34 360 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 NXPE1Q8N323 547 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 PRELID2Q8N945 189 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 GDAP1Q8TB36 358 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 HEXDCQ8WVB3 486 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 PEX13Q92968 403 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 ULK4Q96C45 1275 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 SGSM3Q96HU1 749 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 PBKQ96KB5 322 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 TTC25Q96NG3 672 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 RANBP9Q96S59 729 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 NUDT22Q9BRQ3 303 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-213ENST00000560175 EPB41L1Q9H4G0 881 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 RDH14Q9HBH5 336 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 CASS4Q9NQ75 786 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 THSD1Q9NS62 852 aa12.99□□□□□ -0.33
SMAD3-213ENST00000560175 ZFYVE26Q68DK2 2539 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 C17orf113A0A1B0GUU1 675 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 HGSO14964 777 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-213ENST00000560175 NVLO15381 856 aaKnown RBP12.98□□□□□ -0.33
SMAD3-213ENST00000560175 CEP104O60308 925 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 SNX2O60749 519 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 IFNB1P01574 187 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 CXCR5P32302 372 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 CSF2RBP32927 897 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 GRIA1P42261 906 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 GTF2H3Q13889 308 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 CLCA4Q14CN2 919 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 LONRF2Q1L5Z9 754 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 INSCQ1MX18 579 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 ZNF658BQ4V348 819 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-213ENST00000560175 ARHGAP22Q7Z5H3 698 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 PRUNE1Q86TP1 453 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 TRAPPC5Q8IUR0 188 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 RBM12BQ8IXT5 1001 aaKnown RBP12.98□□□□□ -0.33
SMAD3-213ENST00000560175 FBXO39Q8N4B4 442 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 OR52K1Q8NGK4 314 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 OR2L2Q8NH16 312 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 SGF29Q96ES7 293 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 DNAJC1Q96KC8 554 aaKnown RBP12.98□□□□□ -0.33
SMAD3-213ENST00000560175 SLC38A3Q99624 504 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 SLC40A1Q9NP59 571 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 EIF2B3Q9NR50 452 aaKnown RBP12.98□□□□□ -0.33
SMAD3-213ENST00000560175 RAB6BQ9NRW1 208 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 KCNK4Q9NYG8 393 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 WDR37Q9Y2I8 494 aa12.98□□□□□ -0.33
SMAD3-213ENST00000560175 MGAT4DA6NG13 374 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 ZSCAN12O43309 604 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 TNFSF15O95150 251 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 ZSCAN5DPP0CG00 497 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 THRAP10827 490 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 VCLP18206 1134 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 MSH3P20585 1137 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 ITGALP20701 1170 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 RBMS1P29558 406 aaKnown RBP12.97□□□□□ -0.33
SMAD3-213ENST00000560175 MC4RP32245 332 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 PCBP4P57723 403 aaKnown RBP12.97□□□□□ -0.33
SMAD3-213ENST00000560175 LAMB3Q13751 1172 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 POU6F1Q14863 301 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 C16orf72Q14CZ0 275 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 CYP1B1Q16678 543 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 SKIDA1Q1XH10 827 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 AMZ1Q400G9 498 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 NKAIN2Q5VXU1 208 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 FAM83HQ6ZRV2 1179 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-213ENST00000560175 TMEM26Q6ZUK4 368 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 PIANPQ8IYJ0 282 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 ZNF248Q8NDW4 579 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 OR13J1Q8NGT2 312 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 CMKLR1Q99788 373 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 DPH1Q9BZG8 443 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 STN1Q9H668 368 aaKnown RBP12.97□□□□□ -0.33
SMAD3-213ENST00000560175 SYNDIG1Q9H7V2 258 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 EPB41L5Q9HCM4 733 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms