RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 WDR37Q9Y2I8 494 aa19.38■□□□□ 0.69
RABGGTA-214ENST00000560163 PDZD2O15018 2839 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 LRRC10BA6NIK2 292 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 PDZK1P1A8MUH7 402 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 FTLP02792 175 aaPredicted RBP19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 MMP2P08253 660 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 GZMAP12544 262 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 ZNF165P49910 485 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 DRG2P55039 364 aaKnown RBP19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 GALNT2Q10471 571 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 GPS2Q13227 327 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 NR6A1Q15406 480 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 LRRTM4Q86VH4 590 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 SRRM1Q8IYB3 904 aaKnown RBP19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 D2HGDHQ8N465 521 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 GLIS1Q8NBF1 620 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 TEKT4Q8WW24 435 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 GLYATL1Q969I3 302 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 ZSCAN5AQ9BUG6 496 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 SPATA16Q9BXB7 569 aa19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 LIMA1Q9UHB6 759 aaKnown RBP19.37■□□□□ 0.69
RABGGTA-214ENST00000560163 CSMD2Q7Z408 3487 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 CPNE3O75131 537 aaKnown RBP19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 TMEM63AO94886 807 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 IDSP22304 550 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 CA4P22748 312 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 FECHP22830 423 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 ITGA1P56199 1179 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 DCDC1P59894 354 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 PDE1BQ01064 536 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 UBXN1Q04323 297 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 PLEKHN1Q494U1 663 aaPredicted RBP19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 KHDC1Q4VXA5 237 aaKnown RBP19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 ZNF569Q5MCW4 686 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 LCN10Q6JVE6 187 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 KMT5CQ86Y97 462 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 FAM71BQ8TC56 605 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 CXorf40BQ96DE9 158 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 C5orf34Q96MH7 638 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 TSGA13Q96PP4 275 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 RANBP9Q96S59 729 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 MAP3K3Q99759 626 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 CHST8Q9H2A9 424 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 ASF1BQ9NVP2 202 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 NFKBIL1Q9UBC1 381 aaPredicted RBP19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 PCSK5Q92824 1860 aa19.36■□□□□ 0.69
RABGGTA-214ENST00000560163 CELSR1Q9NYQ6 3014 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 ZNF185O15231 689 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 MFSD11O43934 449 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 HLA-DQB2P05538 268 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 RAB40ALP0C0E4 278 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 CCNCP24863 283 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 SLC25A11Q02978 314 aaKnown RBP19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 ZRANB3Q5FWF4 1079 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 PDPK2PQ6A1A2 396 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 APTXQ7Z2E3 356 aaKnown RBP19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 TRAM1L1Q8N609 369 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 TTC13Q8NBP0 860 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 MR1Q95460 341 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 ZNF501Q96CX3 271 aaPredicted RBP19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 LRFN5Q96NI6 719 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 BARD1Q99728 777 aaKnown RBP19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 NUP85Q9BW27 656 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 ZFYVE1Q9HBF4 777 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 MAP10Q9P2G4 905 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 TMPRSS11EQ9UL52 423 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 SRPK3Q9UPE1 567 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 SCINQ9Y6U3 715 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 ADGRG4Q8IZF6 3080 aa19.35■□□□□ 0.69
RABGGTA-214ENST00000560163 VEGFDO43915 354 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 MTX2O75431 263 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 SCRG1O75711 98 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 CAPN1P07384 714 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 TUBB4BP68371 445 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 HSD11B2P80365 405 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 MMRN1Q13201 1228 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 TUBB2AQ13885 445 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 PAFAH1B3Q15102 231 aaKnown RBP19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 CRB2Q5IJ48 1285 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 PLEKHS1Q5SXH7 462 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 FAM69BQ5VUD6 431 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 ALS2CLQ60I27 953 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 TIGD7Q6NT04 549 aaPredicted RBP19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 MED25Q71SY5 747 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 TMC3Q7Z5M5 1100 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 SLC34A3Q8N130 599 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 TMEM102Q8N9M5 508 aaPredicted RBP19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 TUBB2BQ9BVA1 445 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 NLNQ9BYT8 704 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 KCND1Q9NSA2 647 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 TCFL5Q9UL49 500 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 MYO6Q9UM54 1294 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 TTLL3Q9Y4R7 772 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 POLQO75417 2590 aa19.34■□□□□ 0.69
RABGGTA-214ENST00000560163 A6NL46 340 aa19.33■□□□□ 0.68
RABGGTA-214ENST00000560163 CDK14O94921 469 aa19.33■□□□□ 0.68
RABGGTA-214ENST00000560163 CD48P09326 243 aa19.33■□□□□ 0.68
RABGGTA-214ENST00000560163 VAV2P52735 878 aa19.33■□□□□ 0.68
RABGGTA-214ENST00000560163 IFI16Q16666 785 aaKnown RBP19.33■□□□□ 0.68
RABGGTA-214ENST00000560163 NCBP2-AS2Q69YL0 99 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms