RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 LYSMD3Q7Z3D4 306 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 RALGPS2Q86X27 583 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-216ENST00000559819 TRIML2Q8N7C3 387 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 LKAAEAR1Q8TD35 194 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 DDI1Q8WTU0 396 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 TFAP2CQ92754 450 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 RMND5BQ96G75 393 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-216ENST00000559819 MYRFLQ96LU7 910 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 BOCQ9BWV1 1114 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 VN1R3Q9BXE9 311 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 C1QTNF3Q9BXJ4 246 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 ANKRD60Q9BZ19 345 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 SOX17Q9H6I2 414 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-216ENST00000559819 PNPLA3Q9NST1 481 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 PTTG2Q9NZH5 202 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 OAZ3Q9UMX2 235 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 DMTF1Q9Y222 760 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 MYRFQ9Y2G1 1151 aa9.93□□□□□ -0.82
LRRC28-216ENST00000559819 ANKRD12Q6UB98 2062 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 HNRNPRO43390 633 aaKnown RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 TBL1XO60907 577 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 EEDO75530 441 aaKnown RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 MLYCDO95822 493 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 CHEK2O96017 543 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 CAPN1P07384 714 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 FASP25445 335 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 PSMA3P25788 255 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 GKP32189 559 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 ILF2Q12905 390 aaKnown RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 IL27RAQ6UWB1 636 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 FAM151BQ6UXP7 276 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 NPAS4Q8IUM7 802 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 SLC43A3Q8NBI5 491 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 WFDC5Q8TCV5 224 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 CD99L2Q8TCZ2 262 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 PLD4Q96BZ4 506 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 SCLYQ96I15 445 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 FBXL20Q96IG2 436 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 SEPHS2Q99611 448 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 ADGRE3Q9BY15 652 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 TM6SF2Q9BZW4 377 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 ELAC1Q9H777 363 aaKnown RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 LIN28AQ9H9Z2 209 aaKnown RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 GIPC1O14908 333 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 AOC2O75106 756 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 GUCA1CO95843 209 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 HRH2P25021 359 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 SLC5A2P31639 672 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 PIK3CGP48736 1102 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 OR4D2P58180 307 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 RHOAP61586 193 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 ERVK-8P63133 956 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 SP3Q02447 781 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 ATP6AP1Q15904 470 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 PABPC1LQ4VXU2 614 aaKnown RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 PDCD4Q53EL6 469 aaKnown RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 ADGRF1Q5T601 910 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 LHX8Q68G74 356 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 NANOGP8Q6NSW7 305 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 FRA10AC1Q70Z53 315 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 TMEM199Q8N511 208 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 PROKR1Q8TCW9 393 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 C2orf15Q8WU43 125 aaKnown RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 CDK5RAP1Q96SZ6 601 aaKnown RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 TRIM54Q9BYV2 358 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 GPR63Q9BZJ6 419 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 BRINP2Q9C0B6 783 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 P2RY12Q9H244 342 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 NANOGQ9H9S0 305 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 HACD3Q9P035 362 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 LEF1Q9UJU2 399 aaPredicted RBP9.92□□□□□ -0.82
LRRC28-216ENST00000559819 PADI4Q9UM07 663 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 ZNF711Q9Y462 761 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 COMMD10Q9Y6G5 202 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 PRSS21Q9Y6M0 314 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 TET1Q8NFU7 2136 aa9.92□□□□□ -0.82
LRRC28-216ENST00000559819 RNF103-CHMP3A0A140T963 221 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 H0Y626 953 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ARVCFO00192 962 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 OR7A17O14581 309 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ACOX3O15254 700 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 G6PDP11413 515 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 COL6A1P12109 1028 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CALRP27797 417 aaKnown RBP9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CCT8P50990 548 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 DGKQP52824 942 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 SEMG2Q02383 582 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 FOXM1Q08050 763 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 SMARCB1Q12824 385 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 MAP7Q14244 749 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 PYCR3Q53H96 274 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 COQ5Q5HYK3 327 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 IRAK1BP1Q5VVH5 260 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CHST9Q7L1S5 443 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 GOLGA7Q7Z5G4 137 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 CAMK1DQ8IU85 385 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 ZNF786Q8N393 782 aa9.91□□□□□ -0.82
LRRC28-216ENST00000559819 OR4F6Q8NGB9 312 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms