RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 AP2M1Q96CW1 435 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 OR2M4Q96R27 311 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 LYSMD1Q96S90 227 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 CTRCQ99895 268 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 RIOK2Q9BVS4 552 aaKnown RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 TDRD1Q9BXT4 1180 aaKnown RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 THAP2Q9H0W7 228 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 EPN3Q9H201 632 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 KCNF1Q9H3M0 494 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 APMAPQ9HDC9 416 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 NT5MQ9NPB1 228 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 SIDT1Q9NXL6 827 aaKnown RBP5.74□□□□□ -1.49
USP3-215ENST00000559771 KCTD5Q9NXV2 234 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 SLC39A1Q9NY26 324 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 KCNK4Q9NYG8 393 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 DTLQ9NZJ0 730 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 OGFRQ9NZT2 677 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 TBC1D29Q9UFV1 150 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 NENFQ9UMX5 172 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 CHKBQ9Y259 395 aa5.74□□□□□ -1.49
USP3-215ENST00000559771 NAV2Q8IVL1 2488 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 A0A087X0T9 212 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 GOLGA6CA6NDK9 693 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 GOLGA6BA6NDN3 693 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 A8MU76 341 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 K7EM74 188 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 MATN3O15232 486 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 INPP4BO15327 924 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 PPFIA2O75334 1257 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 DLGAP3O95886 979 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 CYP1A2P05177 515 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 HLA-DQB2P05538 268 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 CCDC172P0C7W6 258 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 FAM228BP0C875 321 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 GOLGA6DP0CG33 693 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 SFTPCP11686 197 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 ZNF28P17035 718 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 F8A1P23610 371 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 GRNP28799 593 aaKnown RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 OAS2P29728 719 aaKnown RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 PBX1P40424 430 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 ARL4AP40617 200 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 GARSP41250 739 aaKnown RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 TAS2R40P59535 323 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 GPLD1P80108 840 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 GBE1Q04446 702 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 KLHL30Q0D2K2 578 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 KCNAB2Q13303 367 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 DPYSL3Q14195 570 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 PIGHQ14442 188 aaPredicted RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 NR1I3Q14994 352 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 IGFBP7Q16270 282 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 SKIDA1Q1XH10 827 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 HENMT1Q5T8I9 393 aaKnown RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 ATP1A1-AS1Q5TC04 95 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 TMEM164Q5U3C3 297 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 BORAQ6PGQ7 559 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 WDR74Q6RFH5 385 aaPredicted RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 USP45Q70EL2 814 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 UNC5BQ8IZJ1 945 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 CACNA2D3Q8IZS8 1091 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 PQLC3Q8N755 202 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 CNTD1Q8N815 330 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 SPC24Q8NBT2 197 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 ANKRD20A12PQ8NF67 263 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 EXD1Q8NHP7 514 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 FATE1Q969F0 183 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 FAF2Q96CS3 445 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 SLC45A3Q96JT2 553 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 BRD8Q9H0E9 1235 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 ADNPQ9H2P0 1102 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 MRPL47Q9HD33 250 aaKnown RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 SARS2Q9NP81 518 aaKnown RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 GOLGA6AQ9NYA3 693 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 VPS18Q9P253 973 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 SLC23A2Q9UGH3 650 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 TUBD1Q9UJT1 453 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 TMPRSS11EQ9UL52 423 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 TMEM184BQ9Y519 407 aaPredicted RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 HEMK1Q9Y5R4 338 aaPredicted RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 MRPS18BQ9Y676 258 aaKnown RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 SCINQ9Y6U3 715 aa5.73□□□□□ -1.49
USP3-215ENST00000559771 MN1Q10571 1320 aaPredicted RBP5.73□□□□□ -1.49
USP3-215ENST00000559771 UQCRHLA0A096LP55 91 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 GOLGA6L9A6NEM1 432 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 NUAK1O60285 661 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 C9P02748 559 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 UQCRHP07919 91 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 MYBL1P10243 752 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 ACP5P13686 325 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 F3P13726 295 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 FOSL1P15407 271 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 ZNF30P17039 623 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 DESP17661 470 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 CCNCP24863 283 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 CSTF2P33240 577 aaKnown RBP eCLIP5.72□□□□□ -1.49
USP3-215ENST00000559771 STAT5AP42229 794 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 SPINT3P49223 89 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 ATP1A2P50993 1020 aa5.72□□□□□ -1.49
USP3-215ENST00000559771 GFERP55789 205 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms