RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 CRLS1Q9UJA2 301 aa8.92□□□□□ -0.98
HMG20A-209ENST00000559728 BTBD3Q9Y2F9 522 aa8.92□□□□□ -0.98
HMG20A-209ENST00000559728 MED16Q9Y2X0 877 aa8.92□□□□□ -0.98
HMG20A-209ENST00000559728 PCDHGB2Q9Y5G2 931 aa8.92□□□□□ -0.98
HMG20A-209ENST00000559728 SLC30A1Q9Y6M5 507 aa8.92□□□□□ -0.98
HMG20A-209ENST00000559728 U3KQA8 63 aa8.92□□□□□ -0.98
HMG20A-209ENST00000559728 CFAP54Q96N23 3096 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 KNL1Q8NG31 2342 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 GPR89AB7ZAQ6 455 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 TRIM38O00635 465 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 NDC80O14777 642 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 YY2O15391 372 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 GRID2O43424 1007 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 DFNA5O60443 496 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 PIAS1O75925 651 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 TTC4O95801 387 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 S1PR4O95977 384 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 TNFP01375 233 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 POLBP06746 335 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 GPR89BP0CG08 455 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 ERVK-10P10266 1014 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 AK4P27144 223 aaPredicted RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 TNFRSF8P28908 595 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 SSTR1P30872 391 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 SLC1A2P43004 574 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 MAGEA4P43358 317 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 GNPDA1P46926 289 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 CCT8P50990 548 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 HNRNPKP61978 463 aaKnown RBP eCLIP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 PRAMEP78395 509 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 CTBSQ01459 385 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 ITIH4Q14624 930 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 NAA30Q147X3 362 aaPredicted RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 TCEA2Q15560 299 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 LONRF1Q17RB8 773 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 AASDHQ4L235 1098 aaPredicted RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 PRRT3Q5FWE3 981 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 SPANXN3Q5MJ09 141 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 CTSL3PQ5NE16 218 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 TEDDM1Q5T9Z0 273 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 ZNF549Q6P9A3 640 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 FAM83HQ6ZRV2 1179 aaPredicted RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 DET1Q7L5Y6 550 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 TAS2R42Q7RTR8 314 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 RD3Q7Z3Z2 195 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 CILP2Q8IUL8 1156 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 CCNJLQ8IV13 435 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 GSPT2Q8IYD1 628 aaKnown RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 LILRA3Q8N6C8 439 aaPredicted RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 GPR161Q8N6U8 529 aaKnown RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 BAHD1Q8TBE0 780 aaPredicted RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 LKAAEAR1Q8TD35 194 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 LMX1AQ8TE12 382 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 IFT81Q8WYA0 676 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 CERS2Q96G23 380 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 LINC00615Q96LM1 132 aaPredicted RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 C9orf72Q96LT7 481 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 CAMK1GQ96NX5 476 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 BIRC8Q96P09 236 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 OR2M4Q96R27 311 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 FAM129AQ9BZQ8 928 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 EPB41L4BQ9H329 900 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 RMI1Q9H9A7 625 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 TMEM9BQ9NQ34 198 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 CATSPERZQ9NTU4 200 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 C20orf96Q9NUD7 363 aaPredicted RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 SPATS2LQ9NUQ6 558 aaKnown RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 TRNAU1APQ9NX07 287 aaKnown RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 NINJ2Q9NZG7 142 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 SAMD15Q9P1V8 674 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 NFU1Q9UMS0 254 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 CSNK1G3Q9Y6M4 447 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 CEP192Q8TEP8 1941 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 ZNF106Q9H2Y7 1883 aaKnown RBP8.91□□□□□ -0.98
HMG20A-209ENST00000559728 PIEZO1Q92508 2521 aa8.91□□□□□ -0.98
HMG20A-209ENST00000559728 FAM186AA6NE01 2351 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.9□□□□□ -0.98
HMG20A-209ENST00000559728 OR2AG2A6NM03 316 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 CXorf49A8MYA2 514 aaPredicted RBP8.9□□□□□ -0.98
HMG20A-209ENST00000559728 LMO7DNF2Z398 122 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 YKT6O15498 198 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 AQP9O43315 295 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 FOXD2O60548 495 aaPredicted RBP8.9□□□□□ -0.98
HMG20A-209ENST00000559728 POP7O75817 140 aaKnown RBP8.9□□□□□ -0.98
HMG20A-209ENST00000559728 ASMTLO95671 621 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 ACP5P13686 325 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 ATP1B2P14415 290 aaPredicted RBP8.9□□□□□ -0.98
HMG20A-209ENST00000559728 BRAFP15056 766 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 OGNP20774 298 aaKnown RBP8.9□□□□□ -0.98
HMG20A-209ENST00000559728 RPS3P23396 243 aaKnown RBP eCLIP8.9□□□□□ -0.98
HMG20A-209ENST00000559728 ARRB1P49407 418 aaPredicted RBP8.9□□□□□ -0.98
HMG20A-209ENST00000559728 PRLHRP49683 370 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 CLCNKAP51800 687 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 VSNL1P62760 191 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 MPP1Q00013 466 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 TIAL1Q01085 375 aaKnown RBP eCLIP8.9□□□□□ -0.98
HMG20A-209ENST00000559728 SLC14A1Q13336 389 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 CTBP1Q13363 440 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 CUL1Q13616 776 aa8.9□□□□□ -0.98
HMG20A-209ENST00000559728 PLA2G4EQ3MJ16 856 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms