RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 OAS3Q9Y6K5 1087 aaKnown RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 ARID1BQ8NFD5 2236 aaPredicted RBP4.31□□□□□ -1.72
SNX1-205ENST00000559339 SHROOM3Q8TF72 1996 aa4.31□□□□□ -1.72
SNX1-205ENST00000559339 TMEM131Q92545 1883 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 WDFY3Q8IZQ1 3526 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 IGHV1OR21-1A0A087WYE8 117 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 C17orf113A0A1B0GUU1 675 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 MGAT4DA6NG13 374 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 MROH6A6NGR9 719 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 H7C0S8 307 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 PGRMC1O00264 195 aaKnown RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 IFRD1O00458 451 aaPredicted RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 HGSO14964 777 aaPredicted RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 PFDN6O15212 129 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 PPM1DO15297 605 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 LDB2O43679 373 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 SUN1O94901 812 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 TNFSF15O95150 251 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 GSTM1P09488 218 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 SLC35G4P0C7Q5 338 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ATP1B2P14415 290 aaPredicted RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 AMD1P17707 334 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 TPH1P17752 444 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 TCP1P17987 556 aaKnown RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 XRCC1P18887 633 aaPredicted RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 PAMP19021 973 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ADRA1DP25100 572 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ACRV1P26436 265 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 NDUFS1P28331 727 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 CD1CP29017 333 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 MC4RP32245 332 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 NSG1P42857 185 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ABCG1P45844 678 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 MAPK9P45984 424 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ZNF140P52738 457 aaPredicted RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 DRG2P55039 364 aaKnown RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 OR1D5P58170 312 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 CDK16Q00536 496 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 B4GALNT1Q00973 533 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 PLOD1Q02809 727 aaPredicted RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 GSTM4Q03013 218 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 CACNG1Q06432 222 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 DMPKQ09013 629 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 SQSTM1Q13501 440 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 OLIG2Q13516 323 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 SEMA5AQ13591 1074 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 TRA2AQ13595 282 aaKnown RBP eCLIP4.3□□□□□ -1.72
SNX1-205ENST00000559339 KRT33BQ14525 404 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 AARS2Q5JTZ9 985 aaKnown RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 ZNF648Q5T619 568 aaPredicted RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 AGAP9Q5VTM2 703 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 BROXQ5VW32 411 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ARMC3Q5W041 872 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 DENND5AQ6IQ26 1287 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 CYB5D1Q6P9G0 228 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 TMEM220Q6QAJ8 160 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 WDR74Q6RFH5 385 aaPredicted RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 IGF2-ASQ6U949 168 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 AFTPHQ6ULP2 937 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ABRAXAS1Q6UWZ7 409 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 WASH2PQ6VEQ5 465 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 DET1Q7L5Y6 550 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 JAMLQ86YT9 394 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ZNF547Q8IVP9 402 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 SFTPA2Q8IWL1 248 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 KLHDC8BQ8IXV7 354 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 NXPE1Q8N323 547 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 RASGEF1AQ8N9B8 481 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 AGBL5Q8NDL9 886 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 PPHLN1Q8NEY8 458 aaKnown RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 OR52K1Q8NGK4 314 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 OR13C4Q8NGS5 318 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 OR2L2Q8NH16 312 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 PATE1Q8WXA2 126 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 NCSTNQ92542 709 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 MAGOHBQ96A72 148 aaKnown RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 SGF29Q96ES7 293 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ZDHHC12Q96GR4 267 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 CDKN2AIPNLQ96HQ2 116 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 SLC46A1Q96NT5 459 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 OSBPL9Q96SU4 736 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 CCM2Q9BSQ5 444 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 TSSK1BQ9BXA7 367 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ASPSCR1Q9BZE9 553 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 FOXP3Q9BZS1 431 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 IL22Q9GZX6 179 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 UCK1Q9HA47 277 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 WASH6PQ9NQA3 447 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 EIF2B3Q9NR50 452 aaKnown RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 NLE1Q9NVX2 485 aaPredicted RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 PIH1D1Q9NWS0 290 aaKnown RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 TRMT1Q9NXH9 659 aaKnown RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 CPNE7Q9UBL6 633 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 SLC23A2Q9UGH3 650 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 FKBPLQ9UIM3 349 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 RABGEF1Q9UJ41 708 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ACSL5Q9ULC5 683 aa4.3□□□□□ -1.72
SNX1-205ENST00000559339 ATXN7L1Q9ULK2 861 aaPredicted RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 TTC7AQ9ULT0 858 aaPredicted RBP4.3□□□□□ -1.72
SNX1-205ENST00000559339 PLEKHM1Q9Y4G2 1056 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 220.9 ms