RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 HTR7P34969 479 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 PPM1FP49593 454 aaPredicted RBP7.33□□□□□ -1.24
SPG11-213ENST00000558988 BLKP51451 505 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 RENBPP51606 427 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 CDH6P55285 790 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 YPEL5P62699 121 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 FANCCQ00597 558 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 TLE3Q04726 772 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 IL10RBQ08334 325 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 RALGDSQ12967 914 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 DPYSQ14117 519 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 ACAP1Q15027 740 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 PTPRRQ15256 657 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 ELOCQ15369 112 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 ARHGAP40Q5TG30 622 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 BROXQ5VW32 411 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 HLA-DQA1Q5Y7H0 255 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 DOK6Q6PKX4 331 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 CYP4V2Q6ZWL3 525 aaPredicted RBP7.33□□□□□ -1.24
SPG11-213ENST00000558988 GKN2Q86XP6 184 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 SFTPA2Q8IWL1 248 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 FSTL5Q8N475 847 aaPredicted RBP7.33□□□□□ -1.24
SPG11-213ENST00000558988 ARL10Q8N8L6 244 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 FAM46DQ8NEK8 389 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 ATL2Q8NHH9 583 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 NSMCE1Q8WV22 266 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 OR1E3Q8WZA6 343 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 NAT6Q93015 286 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 NUS1Q96E22 293 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 BPIFA3Q9BQP9 254 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 NUP85Q9BW27 656 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 EDEM3Q9BZQ6 932 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 DPEP2Q9H4A9 486 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 USP29Q9HBJ7 922 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 CPNE5Q9HCH3 593 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 NT5MQ9NPB1 228 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 ETNK2Q9NVF9 386 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 B4GALT6Q9UBX8 382 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 TCAF1Q9Y4C2 921 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 TESMINQ9Y4I5 508 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 ENTPD2Q9Y5L3 495 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 KIF26BQ2KJY2 2108 aa7.33□□□□□ -1.24
SPG11-213ENST00000558988 TSPAN11A1L157 253 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 TMEM202A6NGA9 273 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 EIF3CLB5ME19 914 aaKnown RBP7.32□□□□□ -1.24
SPG11-213ENST00000558988 TPP1O14773 563 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 TNFSF15O95150 251 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 HTR3BO95264 441 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 MYBL1P10243 752 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 GZMAP12544 262 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 HGFP14210 728 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 PRKCIP41743 596 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 MMP13P45452 471 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 LSSP48449 732 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 SUOXP51687 545 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 UBASH3AP57075 661 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 AP1S1P61966 158 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 POLR2LP62875 67 aaKnown RBP7.32□□□□□ -1.24
SPG11-213ENST00000558988 CCL7P80098 99 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 DPTQ07507 201 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 BIRC2Q13490 618 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 MTM1Q13496 603 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 RFTN1Q14699 578 aaPredicted RBP7.32□□□□□ -1.24
SPG11-213ENST00000558988 IQCB1Q15051 598 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 ZSCAN23Q3MJ62 389 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 AMZ1Q400G9 498 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 TAF1BQ53T94 588 aaPredicted RBP7.32□□□□□ -1.24
SPG11-213ENST00000558988 CCDC122Q5T0U0 273 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 AFMIDQ63HM1 303 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 RAET1GQ6H3X3 334 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 KRTAP5-6Q6L8G9 129 aaPredicted RBP7.32□□□□□ -1.24
SPG11-213ENST00000558988 DPPA4Q7L190 304 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 POLNQ7Z5Q5 900 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 CPNE8Q86YQ8 564 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 PELI3Q8N2H9 469 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 BBS5Q8N3I7 341 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 PGBD5Q8N414 524 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 ZNF248Q8NDW4 579 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 OR56A4Q8NGH8 313 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 CCL4L1Q8NHW4 92 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 FUBP1Q96AE4 644 aaKnown RBP7.32□□□□□ -1.24
SPG11-213ENST00000558988 MRRFQ96E11 262 aaKnown RBP7.32□□□□□ -1.24
SPG11-213ENST00000558988 NSMCE3Q96MG7 304 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 CSPG4P5Q96PW8 444 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 SMIM14Q96QK8 99 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 GFM1Q96RP9 751 aaKnown RBP7.32□□□□□ -1.24
SPG11-213ENST00000558988 EIF3CQ99613 913 aaKnown RBP7.32□□□□□ -1.24
SPG11-213ENST00000558988 BOCQ9BWV1 1114 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 LGR4Q9BXB1 951 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 TMEM168Q9H0V1 697 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 NOD2Q9HC29 1040 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 PCDH18Q9HCL0 1135 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 FGF22Q9HCT0 170 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 THSD1Q9NS62 852 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 IFNKQ9P0W0 207 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 PISDQ9UG56 409 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 CD84Q9UIB8 345 aa7.32□□□□□ -1.24
SPG11-213ENST00000558988 A0A087X0T9 212 aa7.31□□□□□ -1.24
SPG11-213ENST00000558988 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.31□□□□□ -1.24
SPG11-213ENST00000558988 A0A1W2PNU3 283 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms