RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 KRT72Q14CN4 511 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 IRF4Q15306 451 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 BRAT1Q6PJG6 821 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 CYS1Q717R9 158 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 CLNKQ7Z7G1 428 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 PGBD5Q8N414 524 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 ENDOVQ8N8Q3 282 aaKnown RBP10.23□□□□□ -0.77
TPM1-212ENST00000558347 ZNF548Q8NEK5 533 aaPredicted RBP10.23□□□□□ -0.77
TPM1-212ENST00000558347 NBEAQ8NFP9 2946 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 N4BP2L2Q92802 583 aaPredicted RBP10.23□□□□□ -0.77
TPM1-212ENST00000558347 ECHDC3Q96DC8 303 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 AGAP3Q96P47 875 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 PSKH2Q96QS6 385 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 FCRL5Q96RD9 977 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 CEP41Q9BYV8 373 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 TCEAL2Q9H3H9 227 aaPredicted RBP10.23□□□□□ -0.77
TPM1-212ENST00000558347 ATP13A3Q9H7F0 1226 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 RNPEPL1Q9HAU8 725 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 GLOD4Q9HC38 313 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 NPHS2Q9NP85 383 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 RBM22Q9NW64 420 aaKnown RBP eCLIP10.23□□□□□ -0.77
TPM1-212ENST00000558347 TRIM33Q9UPN9 1127 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 ITPR1Q14643 2758 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 CHD6Q8TD26 2715 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 LY6G6EA0A0G2JKS1 128 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 C1QAP02745 245 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 HLA-DQB2P05538 268 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 C1SP09871 688 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 MLNP12872 115 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 MYF5P13349 255 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 CR2P20023 1033 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 ACP1P24666 158 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 CNTFP26441 200 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 SERPINA4P29622 427 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 MAGEA3P43357 314 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 ARFIP2P53365 341 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 HNRNPKP61978 463 aaKnown RBP eCLIP10.23□□□□□ -0.77
TPM1-212ENST00000558347 BCL2L1Q07817 233 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 PRPSAP1Q14558 356 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 CRYMQ14894 314 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 WSCD2Q2TBF2 565 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 KBTBD12Q3ZCT8 623 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 FAXCQ5TGI0 409 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 KCTD11Q693B1 232 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 ALG1LQ6GMV1 187 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 LRRC6Q86X45 466 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 IGDCC3Q8IVU1 814 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 RBFAQ8N0V3 343 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 BBS5Q8N3I7 341 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 MRRFQ96E11 262 aaKnown RBP10.23□□□□□ -0.77
TPM1-212ENST00000558347 GORASP1Q9BQQ3 440 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 TBC1D10AQ9BXI6 508 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 XAB2Q9HCS7 855 aaKnown RBP10.23□□□□□ -0.77
TPM1-212ENST00000558347 NLGN3Q9NZ94 848 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 SLC17A7Q9P2U7 560 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 SEPT3Q9UH03 358 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 HAO1Q9UJM8 370 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 AAR2Q9Y312 384 aaKnown RBP10.23□□□□□ -0.77
TPM1-212ENST00000558347 U3KQA8 63 aa10.23□□□□□ -0.77
TPM1-212ENST00000558347 LRP4O75096 1905 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 MYLKQ15746 1914 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 K7ESM1 405 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 COPEO14579 308 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 LIN7AO14910 233 aaPredicted RBP10.22□□□□□ -0.77
TPM1-212ENST00000558347 SCAMP1O15126 338 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 CCDC22O60826 627 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 KRT38O76015 456 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 ANXA9O76027 345 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 HAUS5O94927 633 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 AP2A1O95782 977 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 APRTP07741 180 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 JUNDP17535 347 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 GM2AP17900 193 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 CALB2P22676 271 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 GEMP55040 296 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 MAXP61244 160 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 AP1S1P61966 158 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 YPEL5P62699 121 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 SARNPP82979 210 aaKnown RBP10.22□□□□□ -0.77
TPM1-212ENST00000558347 RALGDSQ12967 914 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 NAB1Q13506 487 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 ZNF235Q14590 738 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 SLC14A2Q15849 920 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 TAF1BQ53T94 588 aaPredicted RBP10.22□□□□□ -0.77
TPM1-212ENST00000558347 FAM182AQ5T1J6 154 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 HES3Q5TGS1 186 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 ATG16L1Q676U5 607 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 ERAP2Q6P179 960 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 TIFABQ6ZNK6 161 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 TMPRSS12Q86WS5 348 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 PROSER1Q86XN7 944 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 TAB3Q8N5C8 712 aaPredicted RBP10.22□□□□□ -0.77
TPM1-212ENST00000558347 TADA1Q96BN2 335 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 IMP4Q96G21 291 aaKnown RBP10.22□□□□□ -0.77
TPM1-212ENST00000558347 NSL1Q96IY1 281 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 APOLD1Q96LR9 279 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 C7orf26Q96N11 449 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 MLPHQ9BV36 600 aaPredicted RBP10.22□□□□□ -0.77
TPM1-212ENST00000558347 C1QTNF7Q9BXJ2 289 aa10.22□□□□□ -0.77
TPM1-212ENST00000558347 IQCGQ9H095 443 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms