RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 OR56A4Q8NGH8 313 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 OR13C4Q8NGS5 318 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 OR2T11Q8NH01 316 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 PROKR1Q8TCW9 393 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 GBF1Q92538 1859 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 PSMG2Q969U7 264 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 TAMM41Q96BW9 452 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 FUNDC2Q9BWH2 189 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 UGT2B28Q9BY64 529 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 ZYG11BQ9C0D3 744 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 FAM118AQ9NWS6 357 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 DAPK2Q9UIK4 370 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 PATJQ8NI35 1801 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 PTPRDP23468 1912 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 BCAS1O75363 584 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 DNAJB5O75953 348 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 CNTN5O94779 1100 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 NFKBIAP25963 317 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 OPRL1P41146 370 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 PGFP49763 221 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 SPCS2Q15005 226 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 POLD3Q15054 466 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 MAPRE1Q15691 268 aaKnown RBP11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 IMPG1Q17R60 797 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 TYSND1Q2T9J0 566 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 ATP6AP1LQ52LC2 224 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 FKBP9P1Q75LS8 142 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 SCD5Q86SK9 330 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 PARP8Q8N3A8 854 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 CHDHQ8NE62 594 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 FKBP10Q96AY3 582 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 SH3YL1Q96HL8 342 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 PPM1MQ96MI6 270 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 ACOX2Q99424 681 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 PAAF1Q9BRP4 392 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 FEM1AQ9BSK4 669 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 WDR12Q9GZL7 423 aaKnown RBP11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 ADARB2Q9NS39 739 aaKnown RBP11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 FAM105AQ9NUU6 356 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 TMEM248Q9NWD8 314 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 PCTPQ9UKL6 214 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 BAG5Q9UL15 447 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 FAM50BQ9Y247 325 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 PCDHGA8Q9Y5G5 932 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 MAGED1Q9Y5V3 778 aaPredicted RBP11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 CPQQ9Y646 472 aa11.7□□□□□ -0.54
VIPAS39-211ENST00000557658 NCF1BA6NI72 391 aaPredicted RBP11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 NCF1CA8MVU1 366 aaPredicted RBP11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 CDC7O00311 574 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 NCF1P14598 390 aaPredicted RBP11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 GGT1P19440 569 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 FMO4P31512 558 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 GRIK1P39086 918 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 RXRGP48443 463 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 TMED10P49755 219 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 SCNN1GP51170 649 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 MTPNP58546 118 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 TRIM32Q13049 653 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 OXA1LQ15070 435 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 UPP1Q16831 310 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 LDLRAP1Q5SW96 308 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 DLEU7Q6UYE1 221 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 GPRIN3Q6ZVF9 776 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 PGBD5Q8N414 524 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 BRSK1Q8TDC3 778 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 SGCDQ92629 289 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 LPPQ93052 612 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 MUL1Q969V5 352 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 FUBP1Q96AE4 644 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 PKMYT1Q99640 499 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 CGREF1Q99674 301 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 DGCR6LQ9BY27 220 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 MROQ9BYG7 248 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 PRDM5Q9NQX1 630 aaPredicted RBP11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 GIN1Q9NXP7 522 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 DNAJB9Q9UBS3 223 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 ENPP5Q9UJA9 477 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 ZNF225Q9UK10 706 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 IKZF3Q9UKT9 509 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 RIMKLBQ9ULI2 386 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 TRIM17Q9Y577 477 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 MYO16Q9Y6X6 1858 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 KRBA1A5PL33 1030 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 NPEPPSL1A6NEC2 478 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 ARL5CA6NH57 179 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 ARNTLO00327 626 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 IFRD1O00458 451 aaPredicted RBP11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 BTN3A1O00481 513 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 KLK8O60259 260 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 KATNA1O75449 491 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 IDUAP35475 653 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 AGTR2P50052 363 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 RAD23AP54725 363 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 RPS3AP61247 264 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 AQP6Q13520 282 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 SELPLGQ14242 412 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 MEP1AQ16819 746 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 HABP4Q5JVS0 413 aaKnown RBP11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 SULT1C3Q6IMI6 304 aa11.69□□□□□ -0.54
VIPAS39-211ENST00000557658 LRRTM3Q86VH5 581 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms