RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 OTUD3Q5T2D3 398 aaPredicted RBP17.52■□□□□ 0.39
XRCC3-218ENST00000557439 TRPV3Q8NET8 790 aa17.52■□□□□ 0.39
XRCC3-218ENST00000557439 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.52■□□□□ 0.395e-6■■■■□ 22.9
XRCC3-218ENST00000557439 DCUN1D5Q9BTE7 237 aa17.52■□□□□ 0.39
XRCC3-218ENST00000557439 CDC14AQ9UNH5 594 aa17.52■□□□□ 0.39
XRCC3-218ENST00000557439 COCHO43405 550 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 KDELR3O43731 214 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 CD160O95971 181 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 F11P03951 625 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 CAPN1P07384 714 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 G6PDP11413 515 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 HOXB8P17481 243 aaPredicted RBP17.51■□□□□ 0.39
XRCC3-218ENST00000557439 CORO1AP31146 461 aaKnown RBP17.51■□□□□ 0.39
XRCC3-218ENST00000557439 IL2P60568 153 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 FAM189BP81408 668 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 ARF5P84085 180 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 SEMG2Q02383 582 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 IL27RAQ6UWB1 636 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 CLVS1Q8IUQ0 354 aaPredicted RBP17.51■□□□□ 0.39
XRCC3-218ENST00000557439 TMEM199Q8N511 208 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 CENPNQ96H22 339 aaPredicted RBP17.51■□□□□ 0.39
XRCC3-218ENST00000557439 RNF145Q96MT1 663 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 TRIM15Q9C019 465 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 RNF38Q9H0F5 515 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 RNF186Q9NXI6 227 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 ATXN10Q9UBB4 475 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 COMMD10Q9Y6G5 202 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 OR6C75A6NL08 312 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 SYCE1LA8MT33 242 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 A8MX80 341 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 PYGLP06737 847 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 VARSP26640 1264 aaKnown RBP17.51■□□□□ 0.39
XRCC3-218ENST00000557439 MZF1P28698 734 aaPredicted RBP17.51■□□□□ 0.39
XRCC3-218ENST00000557439 TCTN1Q2MV58 587 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 OGFOD2Q6N063 350 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 TMEM214Q6NUQ4 689 aaKnown RBP17.51■□□□□ 0.39
XRCC3-218ENST00000557439 DBF4BQ8NFT6 615 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 OR56A4Q8NGH8 313 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 BIRC7Q96CA5 298 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 BOCQ9BWV1 1114 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 DNMT3LQ9UJW3 386 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 FCF1Q9Y324 198 aaKnown RBP17.51■□□□□ 0.39
XRCC3-218ENST00000557439 PCDHB9Q9Y5E1 797 aa17.51■□□□□ 0.39
XRCC3-218ENST00000557439 GIPC1O14908 333 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 EEDO75530 441 aaKnown RBP17.5■□□□□ 0.39
XRCC3-218ENST00000557439 TMCC1O94876 653 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 ALDH2P05091 517 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 GDF5P43026 501 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 STT3AP46977 705 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 CDH4P55283 916 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 INTS11Q5TA45 600 aaKnown RBP17.5■□□□□ 0.39
XRCC3-218ENST00000557439 NKAPQ8N5F7 415 aaKnown RBP17.5■□□□□ 0.39
XRCC3-218ENST00000557439 CLDN19Q8N6F1 224 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 METTL6Q8TCB7 284 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 TRIM54Q9BYV2 358 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 ACTL8Q9H568 366 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 PREBQ9HCU5 417 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 LTB4R2Q9NPC1 389 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 K7ERQ8 282 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 FFAR3O14843 346 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 CLOCKO15516 846 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 GPR42O15529 346 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 B4GAT1O43505 415 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 CHEK2O96017 543 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 GKP32189 559 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 RFC2P35250 354 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 MAPK10P53779 464 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 SLC36A3Q495N2 470 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 BORAQ6PGQ7 559 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 SPATA19Q7Z5L4 167 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 ZBTB46Q86UZ6 589 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 MFSD2AQ8NA29 543 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 LKAAEAR1Q8TD35 194 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 CASD1Q96PB1 797 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 TM6SF2Q9BZW4 377 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 SLC8A2Q9UPR5 921 aa17.5■□□□□ 0.39
XRCC3-218ENST00000557439 POLR3HQ9Y535 204 aaPredicted RBP17.5■□□□□ 0.39
XRCC3-218ENST00000557439 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.49■□□□□ 0.39
XRCC3-218ENST00000557439 C2orf78A6NCI8 922 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 STX16O14662 325 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 KLK8O60259 260 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 RPLP2P05387 115 aaKnown RBP17.49■□□□□ 0.39
XRCC3-218ENST00000557439 SLC11A2P49281 568 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 ERVK-8P63133 956 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 ZNF177Q13360 481 aaPredicted RBP17.49■□□□□ 0.39
XRCC3-218ENST00000557439 RFTN2Q52LD8 501 aaPredicted RBP17.49■□□□□ 0.39
XRCC3-218ENST00000557439 DNAJC14Q6Y2X3 702 aaPredicted RBP17.49■□□□□ 0.39
XRCC3-218ENST00000557439 OR4F6Q8NGB9 312 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 NSUN3Q9H649 340 aaKnown RBP17.49■□□□□ 0.39
XRCC3-218ENST00000557439 SUN2Q9UH99 717 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 LEF1Q9UJU2 399 aaPredicted RBP17.49■□□□□ 0.39
XRCC3-218ENST00000557439 ANAPC2Q9UJX6 822 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 FADS3Q9Y5Q0 445 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 STC2O76061 302 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 MYF6P23409 242 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 GALK1P51570 392 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 HPCAP84074 193 aa17.49■□□□□ 0.39
XRCC3-218ENST00000557439 PPP1R8Q12972 351 aaKnown RBP17.49■□□□□ 0.39
XRCC3-218ENST00000557439 BTG3Q14201 252 aaPredicted RBP17.49■□□□□ 0.39
XRCC3-218ENST00000557439 ABRAXAS2Q15018 415 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms