RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 KCTD3Q9Y597 815 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 NBPF19A0A087WUL8 3843 aa8.57□□□□□ -1.04
VRK1-206ENST00000557222 CENPEQ02224 2701 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 LOC101059948A0A1B0GTJ6 334 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 A6NCN8 305 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 LRRC53A6NM62 1247 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 DDX3XO00571 662 aaKnown RBP eCLIP8.56□□□□□ -1.04
VRK1-206ENST00000557222 POLR1CO15160 346 aaPredicted RBP8.56□□□□□ -1.04
VRK1-206ENST00000557222 MATN3O15232 486 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 NKX2-8O15522 239 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 STK17BO94768 372 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 ASMTLO95671 621 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 DLGAP3O95886 979 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 C9P02748 559 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 PDHA1P08559 390 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 GP1BBP13224 206 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 F3P13726 295 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 CTPS1P17812 591 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 EPHA1P21709 976 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 CCNCP24863 283 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 GARSP41250 739 aaKnown RBP8.56□□□□□ -1.04
VRK1-206ENST00000557222 STAT5AP42229 794 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 MAXP61244 160 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 KLHL30Q0D2K2 578 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 GALNT2Q10471 571 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 ASIC2Q16515 512 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 SKIDA1Q1XH10 827 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 HENMT1Q5T8I9 393 aaKnown RBP8.56□□□□□ -1.04
VRK1-206ENST00000557222 TIPARPQ7Z3E1 657 aaKnown RBP8.56□□□□□ -1.04
VRK1-206ENST00000557222 PTRH1Q86Y79 214 aaKnown RBP8.56□□□□□ -1.04
VRK1-206ENST00000557222 NCSTNQ92542 709 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 ZNF653Q96CK0 615 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 RIOK2Q9BVS4 552 aaKnown RBP8.56□□□□□ -1.04
VRK1-206ENST00000557222 TDRD1Q9BXT4 1180 aaKnown RBP8.56□□□□□ -1.04
VRK1-206ENST00000557222 CARD9Q9H257 536 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 HSD3B7Q9H2F3 369 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 FAM83DQ9H4H8 585 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 PCDH18Q9HCL0 1135 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 NT5MQ9NPB1 228 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 RAD18Q9NS91 495 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.56□□□□□ -1.04
VRK1-206ENST00000557222 TBC1D29Q9UFV1 150 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 IP6K2Q9UHH9 426 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 ZNHIT2Q9UHR6 403 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 CD84Q9UIB8 345 aa8.56□□□□□ -1.04
VRK1-206ENST00000557222 CNOT6Q9ULM6 557 aaKnown RBP8.56□□□□□ -1.04
VRK1-206ENST00000557222 BZW2Q9Y6E2 419 aaKnown RBP8.56□□□□□ -1.04
VRK1-206ENST00000557222 UTP20O75691 2785 aaKnown RBP8.56□□□□□ -1.04
VRK1-206ENST00000557222 MN1Q10571 1320 aaPredicted RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 GOLGA6L3A6NEY3 463 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 NUAK1O60285 661 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 PRLP01236 227 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 XRCC1P18887 633 aaPredicted RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 TCN2P20062 427 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 IL4RP24394 825 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 CD68P34810 354 aaPredicted RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 CD97P48960 835 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 SPINT3P49223 89 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 ZNF165P49910 485 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 UBE2IP63279 158 aaKnown RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 KLRB1Q12918 225 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 IL11RAQ14626 422 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 PAFAH1B3Q15102 231 aaKnown RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 IFI16Q16666 785 aaKnown RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 HADHQ16836 314 aaKnown RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 SMTNL2Q2TAL5 461 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 FILIP1LQ4L180 1135 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 LACTB2Q53H82 288 aaPredicted RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 ANKRD20A8PQ5CZ79 823 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 CCDC122Q5T0U0 273 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 CCDC183Q5T5S1 534 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 PDPK2PQ6A1A2 396 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 TCTN3Q6NUS6 607 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 CYB5D1Q6P9G0 228 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 RFLNAQ6ZTI6 216 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 MARK2Q7KZI7 788 aaKnown RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 CHST15Q7LFX5 561 aaPredicted RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 KDELC2Q7Z4H8 507 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 RBM12BQ8IXT5 1001 aaKnown RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 AGGF1Q8N302 714 aaeCLIP8.55□□□□□ -1.04
VRK1-206ENST00000557222 FAM26EQ8N5C1 309 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 AOPEPQ8N6M6 819 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 CCHCR1Q8TD31 782 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 STARD8Q92502 1023 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 HSPH1Q92598 858 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 AGAP2Q99490 1192 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 BPIFA3Q9BQP9 254 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 XPO4Q9C0E2 1151 aaKnown RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 NAT10Q9H0A0 1025 aaKnown RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 PCDH9Q9HC56 1237 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 SIDT1Q9NXL6 827 aaKnown RBP8.55□□□□□ -1.04
VRK1-206ENST00000557222 PKD2L2Q9NZM6 624 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 CPNE7Q9UBL6 633 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 KCND3Q9UK17 655 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 MYO9AB2RTY4 2548 aa8.55□□□□□ -1.04
VRK1-206ENST00000557222 TRBV23OR9-2A0A075B6M9 112 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 SMTNL1A8MU46 457 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 A8MU76 341 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 ANKRD66B4E2M5 251 aa8.54□□□□□ -1.04
VRK1-206ENST00000557222 MKRN2OSH3BPM6 223 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms