RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 MYLK2Q9H1R3 596 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 RANBP17Q9H2T7 1088 aaKnown RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 MMADHCQ9H3L0 296 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ST6GALNAC4Q9H4F1 302 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 TRABDQ9H4I3 376 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 SAP30LQ9HAJ7 183 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 RGL1Q9NZL6 768 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 FETUBQ9UGM5 382 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 SLC24A2Q9UI40 661 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 HERC5Q9UII4 1024 aaKnown RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 NOCTQ9UK39 431 aaKnown RBP4.79□□□□□ -1.64
ATXN3-246ENST00000557030 EXOC7Q9UPT5 735 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 NAALADL1Q9UQQ1 740 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 ATAD5Q96QE3 1844 aa4.79□□□□□ -1.64
ATXN3-246ENST00000557030 CLIC1O00299 241 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 NVLO15381 856 aaKnown RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 PIP5K1CO60331 668 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 CCDC22O60826 627 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 NBNO60934 754 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 PEX11AO75192 247 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 SMIM24O75264 130 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 SLITRK3O94933 977 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 SGPL1O95470 568 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 ATP5BP06576 529 aaKnown RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 TPBGLP0DKB5 382 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 SRGAP2BP0DMP2 458 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 DLATP10515 647 aaKnown RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 CYP11B1P15538 503 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 DPEP1P16444 411 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 CHRNB2P17787 502 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 EGR1P18146 543 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 IVDP26440 423 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 ABCD1P33897 745 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 PHBP35232 272 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 KCNJ1P48048 391 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 CTCFP49711 727 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 GPC3P51654 580 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 CFHR3Q02985 330 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 POU5F1BQ06416 359 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 IKQ13123 557 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 DYNC1I2Q13409 638 aaKnown RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 STARD3Q14849 445 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 LARS2Q15031 903 aaKnown RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 ACOX1Q15067 660 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 TMED2Q15363 201 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 DLGAP5Q15398 846 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 CCDC6Q16204 474 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 PDCD2Q16342 344 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 KYNUQ16719 465 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 GSTA3Q16772 222 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 P3H1Q32P28 736 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 TMEM95Q3KNT9 176 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 AASDHQ4L235 1098 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 ZC2HC1CQ53FD0 456 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 TMEM196Q5HYL7 178 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 FKBP1CQ5VVH2 108 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 KRT39Q6A163 491 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 CGB2Q6NT52 195 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 AADACL2Q6P093 401 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 CCDC174Q6PII3 467 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 SLC2A7Q6PXP3 512 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 ANKS1BQ7Z6G8 1248 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 PCGF5Q86SE9 256 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 TRABD2AQ86V40 505 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 PALB2Q86YC2 1186 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 KATNAL2Q8IYT4 538 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 DENND1AQ8TEH3 1009 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 C10orf82Q8WW14 230 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 C1orf54Q8WWF1 131 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 DNAJC9Q8WXX5 260 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 ZNF48Q96MX3 618 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 PCDHB18PQ96TA0 734 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 RIT2Q99578 217 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 TEKT3Q9BXF9 490 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 GLIS2Q9BZE0 524 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 YIPF3Q9GZM5 350 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 FAM192AQ9GZU8 254 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 DEFB129Q9H1M3 183 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 KIF9Q9HAQ2 790 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 TMEM8AQ9HCN3 771 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 MRPL47Q9HD33 250 aaKnown RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 NRIP3Q9NQ35 241 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 EURLQ9NYK6 297 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 PDP2Q9P2J9 529 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 PSMC3IPQ9P2W1 217 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 SCAF8Q9UPN6 1271 aaKnown RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 COQ4Q9Y3A0 265 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.78□□□□□ -1.64
ATXN3-246ENST00000557030 SCINQ9Y6U3 715 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 ZHX2Q9Y6X8 837 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 CACNA1IQ9P0X4 2223 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 SMCHD1A6NHR9 2005 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 KIF13BQ9NQT8 1826 aa4.78□□□□□ -1.64
ATXN3-246ENST00000557030 NFASCO94856 1347 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 MAGEA13PA6NCF6 341 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 A8MUI8 341 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 A8MXQ7 604 aa4.77□□□□□ -1.65
ATXN3-246ENST00000557030 E5RJQ4 531 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms