RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PITX1P78337 314 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-245ENST00000556958 CDK3Q00526 305 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 RUNX1T1Q06455 604 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 ADCY2Q08462 1091 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 KCNAB1Q14722 419 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 PLCL1Q15111 1095 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 C3AR1Q16581 482 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 CYP2A13Q16696 494 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 PLEKHS1Q5SXH7 462 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 TMTC4Q5T4D3 741 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 SHEQ5VZ18 495 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 AFMIDQ63HM1 303 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 IRGCQ6NXR0 463 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 PODNL1Q6PEZ8 512 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 DOK6Q6PKX4 331 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 SPOCD1Q6ZMY3 1216 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 TMEM26Q6ZUK4 368 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 UNC13DQ70J99 1090 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 TMEM110Q86TL2 294 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 TRIM48Q8IWZ4 208 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 DMRTC2Q8IXT2 367 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-245ENST00000556958 DRC7Q8IY82 874 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 ZNF683Q8IZ20 524 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 DSELQ8IZU8 1212 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 DEFB106AQ8N104 65 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 GOT1L1Q8NHS2 421 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-245ENST00000556958 FOXD4L4Q8WXT5 416 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-245ENST00000556958 TFAP2BQ92481 460 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 SEMA4DQ92854 862 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 VOPP1Q96AW1 172 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 NACC2Q96BF6 587 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 CLIP3Q96DZ5 547 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 NUS1Q96E22 293 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 MAGED4Q96JG8 741 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 SLC2A13Q96QE2 648 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 TUBGCP5Q96RT8 1024 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 LMF1Q96S06 567 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 TRIM56Q9BRZ2 755 aaKnown RBP5.63□□□□□ -1.51
ATXN3-245ENST00000556958 POLDIP3Q9BY77 421 aaKnown RBP5.63□□□□□ -1.51
ATXN3-245ENST00000556958 ZYG11BQ9C0D3 744 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 SLC7A5P2Q9GIP4 190 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 TKTL2Q9H0I9 626 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 KBTBD4Q9NVX7 518 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 ASNSD1Q9NWL6 643 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 ADAM21Q9UKJ8 722 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 MEMO1Q9Y316 297 aa5.63□□□□□ -1.51
ATXN3-245ENST00000556958 TRAV17A0A0B4J275 112 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 DYTNA2CJ06 578 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 GOLGA6CA6NDK9 693 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 GOLGA6BA6NDN3 693 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 IDSB3KWA1 339 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 INAFM1C9JVW0 142 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 ARHGEF9O43307 516 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 LDB2O43679 373 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 KDELR3O43731 214 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 CALUO43852 315 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-245ENST00000556958 SNX2O60749 519 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 HSF2BPO75031 334 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 TMCC1O94876 653 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 NEFLP07196 543 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 GOLGA6DP0CG33 693 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 F3P13726 295 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 XRCC1P18887 633 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-245ENST00000556958 IDSP22304 550 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 UGT1A4P22310 534 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 RPL13P26373 211 aaKnown RBP5.62□□□□□ -1.51
ATXN3-245ENST00000556958 HOXC12P31275 282 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 PSMC2P35998 433 aaKnown RBP5.62□□□□□ -1.51
ATXN3-245ENST00000556958 ACVRL1P37023 503 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 GPD2P43304 727 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 NASPP49321 788 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-245ENST00000556958 MXI1P50539 228 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 SNX16P57768 344 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 HSD11B2P80365 405 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 NCF4Q15080 339 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 CDSNQ15517 529 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 DEFB113Q30KQ7 82 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 PRAMEF13Q5VWM6 474 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 RAET1GQ6H3X3 334 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 HMBOX1Q6NT76 420 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 KLHL35Q6PF15 583 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 TMEM270Q6UE05 265 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 FAM92BQ6ZTR7 304 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 BRAPQ7Z569 592 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 ZNF354CQ86Y25 554 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 DNAAF5Q86Y56 855 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 RBM12BQ8IXT5 1001 aaKnown RBP5.62□□□□□ -1.51
ATXN3-245ENST00000556958 CLYBLQ8N0X4 340 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 TAB3Q8N5C8 712 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-245ENST00000556958 PDILTQ8N807 584 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 PHF10Q8WUB8 498 aaKnown RBP5.62□□□□□ -1.51
ATXN3-245ENST00000556958 SDCCAG3Q96C92 435 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 C7orf25Q9BPX7 421 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 NDC1Q9BTX1 674 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 RAB33BQ9H082 229 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 ATP13A3Q9H7F0 1226 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 SEPT11Q9NVA2 429 aaKnown RBP5.62□□□□□ -1.51
ATXN3-245ENST00000556958 GOLGA6AQ9NYA3 693 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 OGFRQ9NZT2 677 aa5.62□□□□□ -1.51
ATXN3-245ENST00000556958 SEMA5BQ9P283 1151 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms