RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 HAUS4Q9H6D7 363 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 ZFYVE1Q9HBF4 777 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 MRPL47Q9HD33 250 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 FGF21Q9NSA1 209 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 EPHA6Q9UF33 1036 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 WDR37Q9Y2I8 494 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 ZNF451Q9Y4E5 1061 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 LRBAP50851 2863 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 SPTBP11277 2137 aa8.86□□□□□ -0.99
HNRNPC-227ENST00000556897 ANKRD17O75179 2603 aaKnown RBP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 SEC16AO15027 2179 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 WIPF3A6NGB9 483 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 LRRC53A6NM62 1247 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 DDX3XO00571 662 aaKnown RBP eCLIP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 KMOO15229 486 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 KRT86O43790 486 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 DPM1O60762 260 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 CEACAM4O75871 244 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 CDK14O94921 469 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 LDLRP01130 860 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 PIRTP0C851 137 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 CDK11BP21127 795 aaKnown RBP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 LPOP22079 712 aaPredicted RBP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 IDSP22304 550 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 CD86P42081 329 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 PDE1BQ01064 536 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 SLC25A11Q02978 314 aaKnown RBP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 ACY1Q03154 408 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 GPS2Q13227 327 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 GALNT3Q14435 633 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 ASIC2Q16515 512 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 KHDC1Q4VXA5 237 aaKnown RBP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 AGAP9Q5VTM2 703 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 FAM69BQ5VUD6 431 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 E4F1Q66K89 784 aaPredicted RBP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 SLC6A19Q695T7 634 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 NCBP2-AS2Q69YL0 99 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 WASH2PQ6VEQ5 465 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 BPHLQ86WA6 291 aaPredicted RBP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 RBM12BQ8IXT5 1001 aaKnown RBP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 RBMXL3Q8N7X1 1067 aaKnown RBP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 FDCSPQ8NFU4 85 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 MR1Q95460 341 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 C19orf60Q96EN9 201 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 ZNF514Q96K75 400 aaPredicted RBP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 BTBD6Q96KE9 485 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 FCRL4Q96PJ5 515 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 MAP3K3Q99759 626 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 TIMM29Q9BSF4 260 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 ZSCAN5AQ9BUG6 496 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 NUP85Q9BW27 656 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 NUDT9Q9BW91 350 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 ADGRE3Q9BY15 652 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 SLC29A3Q9BZD2 475 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 WASH6PQ9NQA3 447 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 HAUS2Q9NVX0 235 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 SEMA5BQ9P283 1151 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 AMACRQ9UHK6 382 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 MYO6Q9UM54 1294 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 SHOC2Q9UQ13 582 aa8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 FARSAQ9Y285 508 aaKnown RBP8.85□□□□□ -0.99
HNRNPC-227ENST00000556897 POLEQ07864 2286 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 DIDO1Q9BTC0 2240 aaKnown RBP8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 C2orf72A6NCS6 295 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 A6NL46 340 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 ZNF185O15231 689 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 CPNE3O75131 537 aaKnown RBP8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 SCRG1O75711 98 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 TMEM63AO94886 807 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 MMP2P08253 660 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 MYBL1P10243 752 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 FECHP22830 423 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 CCNCP24863 283 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 ARL4DP49703 201 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 DCDC1P59894 354 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 TUBB4BP68371 445 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 HSD11B2P80365 405 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 MYL5Q02045 173 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 TUBB2AQ13885 445 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 PIGHQ14442 188 aaPredicted RBP8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 PAFAH1B3Q15102 231 aaKnown RBP8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 NR6A1Q15406 480 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 IFI16Q16666 785 aaKnown RBP8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 DNTTIP2Q5QJE6 756 aaKnown RBP8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 FAM182AQ5T1J6 154 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 IZUMO3Q5VZ72 239 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 ZNF517Q6ZMY9 492 aaPredicted RBP8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 TICAM1Q8IUC6 712 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 TRAPPC5Q8IUR0 188 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 TMEM126BQ8IUX1 230 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 RHOT1Q8IXI2 618 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 PARP9Q8IXQ6 854 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 TTC30BQ8N4P2 665 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 TRAM1L1Q8N609 369 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 SLC38A9Q8NBW4 561 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 GPR150Q8NGU9 434 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 ADAMTS17Q8TE56 1095 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 FATE1Q969F0 183 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 PNPLA2Q96AD5 504 aa8.84□□□□□ -0.99
HNRNPC-227ENST00000556897 TRIM11Q96F44 468 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms