RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ATP5DP30049 168 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 AKT1P31749 480 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 SKIV2L2P42285 1042 aaKnown RBP11.11□□□□□ -0.63
FOXN3-212ENST00000556541 CTSKP43235 329 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 MSH2P43246 934 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 RXRGP48443 463 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 CSRP3P50461 194 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 MPP1Q00013 466 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 POU4F1Q01851 419 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 PDE1CQ14123 709 aaPredicted RBP11.11□□□□□ -0.63
FOXN3-212ENST00000556541 FZD2Q14332 565 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 CASP8Q14790 479 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 ZNF658BQ4V348 819 aaPredicted RBP11.11□□□□□ -0.63
FOXN3-212ENST00000556541 PYCR3Q53H96 274 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 PLA2G2CQ5R387 149 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 UGT3A1Q6NUS8 523 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 IL27RAQ6UWB1 636 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 TIFABQ6ZNK6 161 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 CAPN12Q6ZSI9 719 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 HDXQ7Z353 690 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 LRRTM4Q86VH4 590 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 CTAGE3PQ8IX95 158 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 PPM1NQ8N819 430 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 RASGEF1AQ8N9B8 481 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 SUMF1Q8NBK3 374 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 GDAP1Q8TB36 358 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 DCAKDQ8WVC6 231 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 VPS39Q96JC1 886 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 AARSD1Q9BTE6 412 aaKnown RBP11.11□□□□□ -0.63
FOXN3-212ENST00000556541 CCDC68Q9H2F9 335 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 FAM96AQ9H5X1 160 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 IL1RAPL1Q9NZN1 696 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 LGALS13Q9UHV8 139 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 SMG5Q9UPR3 1016 aaKnown RBP11.11□□□□□ -0.63
FOXN3-212ENST00000556541 RALGAPA1Q6GYQ0 2036 aa11.11□□□□□ -0.63
FOXN3-212ENST00000556541 TMEM131Q92545 1883 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 IQANK1A0A1B0GTG1 560 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 CCDC189A1A4V9 331 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 MGAT4DA6NG13 374 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 TMEM202A6NGA9 273 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 GRID2O43424 1007 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 FOXD2O60548 495 aaPredicted RBP11.1□□□□□ -0.63
FOXN3-212ENST00000556541 KRT37O76014 449 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 CSF2P04141 144 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 ITGA2BP08514 1039 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 PRSS56P0CW18 603 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 ZNF8P17098 575 aaPredicted RBP11.1□□□□□ -0.63
FOXN3-212ENST00000556541 FDXRP22570 491 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 SLC26A3P40879 764 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 MAGEA12P43365 314 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 C21orf59P57076 290 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 SRP54P61011 504 aaKnown RBP11.1□□□□□ -0.63
FOXN3-212ENST00000556541 NHLH1Q02575 133 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 RPA4Q13156 261 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 GBX1Q14549 363 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 ZKSCAN8Q15776 578 aaPredicted RBP11.1□□□□□ -0.63
FOXN3-212ENST00000556541 ZNF423Q2M1K9 1284 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 CTSL3PQ5NE16 218 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 LRRC8EQ6NSJ5 796 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 ZNF549Q6P9A3 640 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 CNSTQ6PJW8 725 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 C11orf96Q7Z7L8 435 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 LCA5Q86VQ0 697 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 ZNF547Q8IVP9 402 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 HM13Q8TCT9 377 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 TSPAN17Q96FV3 270 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 MYOCQ99972 504 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 CCM2Q9BSQ5 444 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 BOCQ9BWV1 1114 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 MIR1-1HGQ9H1L0 117 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 OR2AG1Q9H205 316 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 FGF22Q9HCT0 170 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 FBXO6Q9NRD1 293 aaPredicted RBP11.1□□□□□ -0.63
FOXN3-212ENST00000556541 SPATS2LQ9NUQ6 558 aaKnown RBP11.1□□□□□ -0.63
FOXN3-212ENST00000556541 TAS2R13Q9NYV9 303 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 KLQ9UEF7 1012 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 SLC6A14Q9UN76 642 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 PLAAQ9Y263 795 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 VWA7Q9Y334 891 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 SLCO1B1Q9Y6L6 691 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 USP34Q70CQ2 3546 aa11.1□□□□□ -0.63
FOXN3-212ENST00000556541 FAM95CA0A1B0GW59 222 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 UBA6A0AVT1 1052 aaPredicted RBP11.09□□□□□ -0.63
FOXN3-212ENST00000556541 H3BM21 787 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 MAP2K7O14733 419 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 RASGRF2O14827 1237 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 LIN7AO14910 233 aaPredicted RBP11.09□□□□□ -0.63
FOXN3-212ENST00000556541 OR1I1O60431 355 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 WISP3O95389 354 aaPredicted RBP11.09□□□□□ -0.63
FOXN3-212ENST00000556541 ASMTLO95671 621 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 TNFP01375 233 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 SHBGP04278 402 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 SYPP08247 313 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 SNRPAP09012 282 aaKnown RBP11.09□□□□□ -0.63
FOXN3-212ENST00000556541 ZNF883P0CG24 379 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 CBSLP0DN79 551 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 VCLP18206 1134 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 MAOBP27338 520 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 CBSP35520 551 aa11.09□□□□□ -0.63
FOXN3-212ENST00000556541 MAPK9P45984 424 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms