RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 UGT1A9O60656 530 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 STK17BO94768 372 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 ANKRD34CP0C6C1 535 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 UGT1A6P19224 532 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 UGT1A1P22309 533 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 UGT1A4P22310 534 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 SPAM1P38567 509 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 MARCKSL1P49006 195 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 NFKB2Q00653 900 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 FOXM1Q08050 763 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 SLC1A5Q15758 541 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 CHRNA6Q15825 494 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 C11orf96Q7Z7L8 435 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 DTX3LQ8TDB6 740 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 RBM41Q96IZ5 413 aaKnown RBP22.21■■□□□ 1.15
ACTN1-220ENST00000556433 QKIQ96PU8 341 aaKnown RBP eCLIP22.21■■□□□ 1.15
ACTN1-220ENST00000556433 HEMGNQ9BXL5 484 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 TRIM5Q9C035 493 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 UGT1A7Q9HAW7 530 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 UGT1A10Q9HAW8 530 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 UGT1A8Q9HAW9 530 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 SLC40A1Q9NP59 571 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 GEMIN8Q9NWZ8 242 aaKnown RBP22.21■■□□□ 1.15
ACTN1-220ENST00000556433 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.21■■□□□ 1.155e-7■■■■□ 24
ACTN1-220ENST00000556433 TRHDEQ9UKU6 1024 aa22.21■■□□□ 1.15
ACTN1-220ENST00000556433 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.21■■□□□ 1.15
ACTN1-220ENST00000556433 TMEM184BQ9Y519 407 aaPredicted RBP22.21■■□□□ 1.15
ACTN1-220ENST00000556433 LOC101059948A0A1B0GTJ6 334 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 HACD1B0YJ81 288 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 NKX2-8O15522 239 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 BUD23O43709 281 aaKnown RBP22.2■■□□□ 1.14
ACTN1-220ENST00000556433 LCA5LO95447 670 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 HLA-DPA1P20036 260 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 LEPRP48357 1165 aaKnown RBP22.2■■□□□ 1.14
ACTN1-220ENST00000556433 SEPHS1P49903 392 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 MPP3Q13368 585 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 SPA17Q15506 151 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 PPP2R5EQ16537 467 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 FAM151BQ6UXP7 276 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 GLT6D1Q7Z4J2 308 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 RBM12BQ8IXT5 1001 aaKnown RBP22.2■■□□□ 1.14
ACTN1-220ENST00000556433 UNC5BQ8IZJ1 945 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 SLC45A3Q96JT2 553 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 EFHD1Q9BUP0 239 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 TRIT1Q9H3H1 467 aaKnown RBP22.2■■□□□ 1.14
ACTN1-220ENST00000556433 SIDT1Q9NXL6 827 aaKnown RBP22.2■■□□□ 1.14
ACTN1-220ENST00000556433 RSPH14Q9UHP6 348 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 SPTA1P02549 2419 aa22.2■■□□□ 1.14
ACTN1-220ENST00000556433 FLNBO75369 2602 aaKnown RBP22.2■■□□□ 1.14
ACTN1-220ENST00000556433 GLYATL1P3A0A0U1RQE8 302 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 KCNJ13O60928 360 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 PPFIA2O75334 1257 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 POP7O75817 140 aaKnown RBP22.19■■□□□ 1.14
ACTN1-220ENST00000556433 ABHD18Q0P651 414 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 GPR18Q14330 331 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 LDLRAP1Q5SW96 308 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 BBS12Q6ZW61 710 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 AMZ2Q86W34 360 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 CCDC170Q8IYT3 715 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 RASGEF1AQ8N9B8 481 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 KRT35Q92764 455 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 ZCCHC2Q9C0B9 1178 aaKnown RBP22.19■■□□□ 1.14
ACTN1-220ENST00000556433 SLC25A18Q9H1K4 315 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 C10orf88Q9H8K7 445 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 WDR37Q9Y2I8 494 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 PKP3Q9Y446 797 aa22.19■■□□□ 1.14
ACTN1-220ENST00000556433 H7C0C1 242 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 TOX3O15405 576 aaPredicted RBP22.18■■□□□ 1.14
ACTN1-220ENST00000556433 RASSF9O75901 435 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 CA5AP35218 305 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 HALP42357 657 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 ATP5OP48047 213 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 KCNC4Q03721 635 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 XRCC4Q13426 336 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 CCDC181Q5TID7 509 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 C11orf63Q6NUN7 778 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 TMEM220Q6QAJ8 160 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 SARM1Q6SZW1 724 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 DAAM2Q86T65 1068 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 RSC1A1Q92681 617 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 CATSPER2Q96P56 530 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 FSD1LQ9BXM9 530 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 ADNPQ9H2P0 1102 aa22.18■■□□□ 1.14
ACTN1-220ENST00000556433 LUC7LQ9NQ29 371 aaKnown RBP22.18■■□□□ 1.14
ACTN1-220ENST00000556433 STX7O15400 261 aaKnown RBP22.17■■□□□ 1.14
ACTN1-220ENST00000556433 GPR39O43194 453 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 KIF1CO43896 1103 aaKnown RBP22.17■■□□□ 1.14
ACTN1-220ENST00000556433 WISP1O95388 367 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 DLGAP3O95886 979 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 AGTP01019 485 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 PRKAR1AP10644 381 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 RBL1P28749 1068 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 CCR10P46092 362 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 CTSCP53634 463 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 SH3BP2P78314 561 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 ITGA9Q13797 1035 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 PTPRCAPQ14761 206 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 GPRC6AQ5T6X5 926 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 CACHD1Q5VU97 1274 aa22.17■■□□□ 1.14
ACTN1-220ENST00000556433 ATG14Q6ZNE5 492 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms