RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TPP1O14773 563 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 KPNA5O15131 536 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 GPR39O43194 453 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 AQP9O43315 295 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 PCDHGA12O60330 932 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 DNAJC6O75061 913 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 MTX2O75431 263 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 ERLIN1O75477 346 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 POP7O75817 140 aaKnown RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 PIAS2O75928 621 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 ESR1P03372 595 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 SLC2A4P14672 509 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 RPS3P23396 243 aaKnown RBP eCLIP7.53□□□□□ -1.2
TDP1-214ENST00000556063 EPHA8P29322 1005 aaPredicted RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 ECHS1P30084 290 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 POLD2P49005 469 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 PRLHRP49683 370 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 CDKN1CP49918 316 aaPredicted RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 PMS2P54278 862 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 ADARP55265 1226 aaKnown RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 EIF3BP55884 814 aaKnown RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 BNC1Q01954 994 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 PLOD1Q02809 727 aaPredicted RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 CTBP1Q13363 440 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 TMED2Q15363 201 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 KYNUQ16719 465 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 BCL7AQ4VC05 210 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 ZNF542PQ5EBM4 170 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 PRRT3Q5FWE3 981 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 PRAMEF14Q5SWL7 426 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 TPRG1LQ5T0D9 272 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 ZNF648Q5T619 568 aaPredicted RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 EMBQ6PCB8 327 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 TRMT10BQ6PF06 316 aaKnown RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 LVRNQ6Q4G3 990 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 CRTC3Q6UUV7 619 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 CAPN12Q6ZSI9 719 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 DET1Q7L5Y6 550 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 ASCL5Q7RTU5 278 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 TAF8Q7Z7C8 310 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 GALNT7Q86SF2 657 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 AMZ2Q86W34 360 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 SLC26A11Q86WA9 606 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 CNTN4Q8IWV2 1026 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 CTAGE3PQ8IX95 158 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 DCLK2Q8N568 766 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 BEND7Q8N7W2 519 aaPredicted RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 LMX1AQ8TE12 382 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 SGF29Q96ES7 293 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 PDXPQ96GD0 296 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 CYTH2Q99418 400 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 CCDC77Q9BR77 488 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 WDR83Q9BRX9 315 aaKnown RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 TRIM56Q9BRZ2 755 aaKnown RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 TIMM29Q9BSF4 260 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 DUSP23Q9BVJ7 150 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 PARD6BQ9BYG5 372 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 CDC42EP4Q9H3Q1 356 aaKnown RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 LRRC4CQ9HCJ2 640 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 MRPL40Q9NQ50 206 aaKnown RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 TM7SF3Q9NS93 570 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 NINJ2Q9NZG7 142 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 MARCH4Q9P2E8 410 aaPredicted RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.53□□□□□ -1.2
TDP1-214ENST00000556063 RAPGEFL1Q9UHV5 662 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 CORO1CQ9ULV4 474 aaPredicted RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 COMMD10Q9Y6G5 202 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 IKBKGQ9Y6K9 419 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 V9GYY5 206 aaPredicted RBP7.53□□□□□ -1.2
TDP1-214ENST00000556063 TMEM131Q92545 1883 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 PCDH15Q96QU1 1955 aa7.53□□□□□ -1.2
TDP1-214ENST00000556063 A0A087WUV0 522 aaPredicted RBP7.52□□□□□ -1.21
TDP1-214ENST00000556063 C17orf113A0A1B0GUU1 675 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 MGAT4DA6NG13 374 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 FAM159BA6NKW6 160 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 OR2AG2A6NM03 316 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 E5RI56 91 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 LMO7DNF2Z398 122 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 FLRT2O43155 660 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 ACSL3O95573 720 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 S1PR4O95977 384 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 APOA4P06727 396 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 ABHD2P08910 425 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 PRSS56P0CW18 603 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 ACP5P13686 325 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 PKMP14618 531 aaKnown RBP7.52□□□□□ -1.21
TDP1-214ENST00000556063 IDSP22304 550 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 TGM1P22735 817 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 DGKAP23743 735 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 ACTR1BP42025 376 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 SLC1A2P43004 574 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 LEPRP48357 1165 aaKnown RBP7.52□□□□□ -1.21
TDP1-214ENST00000556063 CD151P48509 253 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 CLCNKAP51800 687 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 CTSCP53634 463 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 ACTR1AP61163 376 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 VSNL1P62760 191 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 ARHGAP8P85298 464 aa7.52□□□□□ -1.21
TDP1-214ENST00000556063 CTBSQ01459 385 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms