RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	HMG20A	Q9NP66	347 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	ATAD3A	Q9NVI7	634 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	MRPL39	Q9NYK5	338 aa	Known RBP	12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	POLR2A	P24928	1970 aa	Known RBP	12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	IQCM	A0A1B0GVH7	501 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	MATN3	O15232	486 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	CHRNA1	P02708	482 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	FUT4	P22083	530 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	LSAMP	Q13449	338 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	RGS21	Q2M5E4	152 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	REP15	Q6BDI9	236 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	YAF2	Q8IY57	180 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	COPS4	Q9BT78	406 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	UNC93B1	Q9H1C4	597 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	ARL15	Q9NXU5	204 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	FGF10	O15520	208 aa	Predicted RBP	12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	RNASEH2A	O75792	299 aa	Known RBP	12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	HLA-DQB2	P05538	268 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	SBK3	P0C264	359 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	GATAD2A	Q86YP4	633 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	AHI1	Q8N157	1196 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	OR7D4	Q8NG98	312 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	CLHC1	Q8NHS4	586 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	ASB9	Q96DX5	294 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	KLHL32	Q96NJ5	620 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	OLFM1	Q99784	485 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	POLR1E	Q9GZS1	481 aa	Known RBP	12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	RAD21L1	Q9H4I0	556 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	SERHL2	Q9H4I8	314 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	SERHL	Q9NQF3	203 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	RIMS3	Q9UJD0	308 aa		12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	TDRKH	Q9Y2W6	561 aa	Known RBP	12.18	□□□□□ -0.46
TMPO-212	ENST00000556029	TCAF2	A6NFQ2	919 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	GABRR2	P28476	465 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	ARL4D	P49703	201 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	NR1H2	P55055	460 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	GK3P	Q14409	553 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	CLEC6A	Q6EIG7	209 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	GLT6D1	Q7Z4J2	308 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	TMEM126B	Q8IUX1	230 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	C8orf59	Q8N0T1	100 aa	Predicted RBP	12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	LILRA2	Q8N149	483 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	ZNF540	Q8NDQ6	660 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	PTCD2	Q8WV60	388 aa	Known RBP	12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	SELENOM	Q8WWX9	145 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	PGAP3	Q96FM1	320 aa	Predicted RBP	12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	IGFLR1	Q9H665	355 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	COQ10B	Q9H8M1	238 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	GKN1	Q9NS71	199 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	TRAF6	Q9Y4K3	522 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029		E9PAM4	449 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	TBL1X	O60907	577 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	CTPS1	P17812	591 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	CLCN5	P51795	746 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	ACSM2A	Q08AH3	577 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	SIM2	Q14190	667 aa	Predicted RBP	12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	RFTN1	Q14699	578 aa	Predicted RBP	12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	PAGE2B	Q5JRK9	111 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	PITRM1	Q5JRX3	1037 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	ACSM2B	Q68CK6	577 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	KLHDC10	Q6PID8	442 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	NEK10	Q6ZWH5	1172 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	GPSM1	Q86YR5	675 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	HERC6	Q8IVU3	1022 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	HDAC10	Q969S8	669 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	PPM1M	Q96MI6	270 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	CERS4	Q9HA82	394 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	OGDHL	Q9ULD0	1010 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	TPRKB	Q9Y3C4	175 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029		A8MT66	165 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	LBP	P18428	481 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	DNAJB1	P25685	340 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	DPP6	P42658	865 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	DSC2	Q02487	901 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	SULT2A1	Q06520	285 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	PTPRN	Q16849	979 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	DGUOK	Q16854	277 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	KIAA0930	Q6ICG6	404 aa	Predicted RBP	12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	PAOX	Q6QHF9	649 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	CASP12	Q6UXS9	341 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	DET1	Q7L5Y6	550 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	UBE2J2	Q8N2K1	259 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	SLAIN1	Q8ND83	568 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	IRGQ	Q8WZA9	623 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	TSGA13	Q96PP4	275 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	CYP2S1	Q96SQ9	504 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	CHID1	Q9BWS9	393 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	KATNBL1	Q9H079	304 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	OSBPL2	Q9H1P3	480 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	PTTG2	Q9NZH5	202 aa		12.17	□□□□□ -0.46
TMPO-212	ENST00000556029	FAM220BP	B1ANY3	271 aa		12.16	□□□□□ -0.46
TMPO-212	ENST00000556029	CRAT	P43155	626 aa		12.16	□□□□□ -0.46
TMPO-212	ENST00000556029	MAPKAPK3	Q16644	382 aa		12.16	□□□□□ -0.46
TMPO-212	ENST00000556029	PPP1R3A	Q16821	1122 aa		12.16	□□□□□ -0.46
TMPO-212	ENST00000556029	TRIM71	Q2Q1W2	868 aa	Known RBP	12.16	□□□□□ -0.46
TMPO-212	ENST00000556029	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.16	□□□□□ -0.46
TMPO-212	ENST00000556029	RALGPS2	Q86X27	583 aa	Predicted RBP	12.16	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms