RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 SPO11Q9Y5K1 396 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 SLC30A1Q9Y6M5 507 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 RPS6KL1Q9Y6S9 549 aa11.31□□□□□ -0.6
LRP1-209ENST00000555941 ZNF106Q9H2Y7 1883 aaKnown RBP11.3□□□□□ -0.6
LRP1-209ENST00000555941 KLHL33A6NCF5 533 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 HACD1B0YJ81 288 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 PYCARD-AS1I3L0S3 204 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 AURKAO14965 403 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 ARHGAP6O43182 974 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 CST8O60676 142 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 MFAP3LO75121 409 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 MT-ND3P03897 115 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 FGF5P12034 268 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 BRAFP15056 766 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 TYRP1P17643 537 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 HLA-DPA1P20036 260 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 TCN2P20062 427 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 COMTP21964 271 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 RPL10P27635 214 aaKnown RBP11.3□□□□□ -0.6
LRP1-209ENST00000555941 GFERP55789 205 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 WNT3AP56704 352 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 NFKB2Q00653 900 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 WASHC5Q12768 1159 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 ITGA9Q13797 1035 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 SEPT6Q14141 434 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 PLA2G4EQ3MJ16 856 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.3□□□□□ -0.6
LRP1-209ENST00000555941 TFDP3Q5H9I0 405 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 KDELC1Q6UW63 502 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 C11orf96Q7Z7L8 435 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 AMZ2Q86W34 360 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 BPHLQ86WA6 291 aaPredicted RBP11.3□□□□□ -0.6
LRP1-209ENST00000555941 TRAPPC5Q8IUR0 188 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 RCOR2Q8IZ40 523 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 TTC30BQ8N4P2 665 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 C9orf43Q8TAL5 461 aaPredicted RBP11.3□□□□□ -0.6
LRP1-209ENST00000555941 GDAP1Q8TB36 358 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 STARD8Q92502 1023 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 P3H4Q92791 437 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 ZNF514Q96K75 400 aaPredicted RBP11.3□□□□□ -0.6
LRP1-209ENST00000555941 TGM7Q96PF1 710 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 FCRL4Q96PJ5 515 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 FCRL5Q96RD9 977 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 IL17CQ9P0M4 197 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 SEMA5BQ9P283 1151 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 KCND3Q9UK17 655 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 TRHDEQ9UKU6 1024 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 TMPRSS11EQ9UL52 423 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 KCTD3Q9Y597 815 aa11.3□□□□□ -0.6
LRP1-209ENST00000555941 FLNCQ14315 2725 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 HECTD1Q9ULT8 2610 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 MTX2O75431 263 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 RASSF9O75901 435 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 ZRANB2O95218 330 aaKnown RBP eCLIP11.29□□□□□ -0.6
LRP1-209ENST00000555941 CCNYL3P0C7X3 344 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 PRKAR1AP10644 381 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 NELFEP18615 380 aaKnown RBP11.29□□□□□ -0.6
LRP1-209ENST00000555941 NFKB1P19838 968 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 FECHP22830 423 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 CD68P34810 354 aaPredicted RBP11.29□□□□□ -0.6
LRP1-209ENST00000555941 SPAM1P38567 509 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 CASRP41180 1078 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 TLE1Q04724 770 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 MPP3Q13368 585 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 XRCC4Q13426 336 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 GPR18Q14330 331 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 SLC1A5Q15758 541 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 SEPT7Q16181 437 aaKnown RBP11.29□□□□□ -0.6
LRP1-209ENST00000555941 KHDC1Q4VXA5 237 aaKnown RBP11.29□□□□□ -0.6
LRP1-209ENST00000555941 SIRPB2Q5JXA9 342 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 CACHD1Q5VU97 1274 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 SPOCD1Q6ZMY3 1216 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 PID1Q7Z2X4 250 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 RASGRP3Q8IV61 690 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 KATNAL2Q8IYT4 538 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 UNC5BQ8IZJ1 945 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 BEND7Q8N7W2 519 aaPredicted RBP11.29□□□□□ -0.6
LRP1-209ENST00000555941 DDHD1Q8NEL9 900 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 ZFPM2Q8WW38 1151 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 UBXN4Q92575 508 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 STAMBPL1Q96FJ0 436 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 OR6C1Q96RD1 312 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 FERMT1Q9BQL6 677 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 TRIM4Q9C037 500 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 BPIFA1Q9NP55 256 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 PDE7BQ9NP56 450 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 SMOXQ9NWM0 555 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 UBP1Q9NZI7 540 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 KLHL8Q9P2G9 620 aaPredicted RBP11.29□□□□□ -0.6
LRP1-209ENST00000555941 SAE1Q9UBE0 346 aaPredicted RBP11.29□□□□□ -0.6
LRP1-209ENST00000555941 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.29□□□□□ -0.6
LRP1-209ENST00000555941 PKP3Q9Y446 797 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 PCDHGA6Q9Y5G7 932 aa11.29□□□□□ -0.6
LRP1-209ENST00000555941 MAST4O15021 2626 aa11.28□□□□□ -0.6
LRP1-209ENST00000555941 GLYATL1P3A0A0U1RQE8 302 aa11.28□□□□□ -0.6
LRP1-209ENST00000555941 OR52A4PA6NMU1 304 aa11.28□□□□□ -0.6
LRP1-209ENST00000555941 AKR1B15C9JRZ8 316 aaPredicted RBP11.28□□□□□ -0.6
LRP1-209ENST00000555941 POP7O75817 140 aaKnown RBP11.28□□□□□ -0.6
LRP1-209ENST00000555941 NDUFA10O95299 355 aa11.28□□□□□ -0.6
LRP1-209ENST00000555941 PYGMP11217 842 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms