RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 MARCH7Q9H992 704 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 ZNF277Q9NRM2 450 aaPredicted RBP7.7□□□□□ -1.18
CHD8-209ENST00000555935 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.7□□□□□ -1.18
CHD8-209ENST00000555935 POLR3BQ9NW08 1133 aaPredicted RBP7.7□□□□□ -1.18
CHD8-209ENST00000555935 USP22Q9UPT9 525 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 BTRCQ9Y297 605 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 PCDHGA10Q9Y5H3 936 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 LOC285556D6RIA3 1793 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 AGAP5A6NIR3 686 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 I6L893 689 aaPredicted RBP7.7□□□□□ -1.18
CHD8-209ENST00000555935 ARNTLO00327 626 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 GNGT2O14610 69 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 SNX2O60749 519 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 GUCY1B2O75343 617 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 CYP11A1P05108 521 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 PCNAP12004 261 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 LMO2P25791 158 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 ALDH4A1P30038 563 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 SOX11P35716 441 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 NKX2-5P52952 324 aaPredicted RBP7.7□□□□□ -1.18
CHD8-209ENST00000555935 CDKN2DP55273 166 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 UFM1P61960 85 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 NCS1P62166 190 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 ERVK-8P63133 956 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 SLC35A2P78381 396 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 ZNF404Q494X3 552 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 XKR7Q5GH72 579 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 C9orf57Q5W0N0 161 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 FAM219BQ5XKK7 198 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 STEAP3Q658P3 488 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 PNCKQ6P2M8 343 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 RASSF5Q8WWW0 418 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 TEX37Q96LM6 180 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 ZNF560Q96MR9 790 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 KCNA7Q96RP8 456 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 EMILIN2Q9BXX0 1053 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 ALOXE3Q9BYJ1 711 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 TFB2MQ9H5Q4 396 aaKnown RBP7.7□□□□□ -1.18
CHD8-209ENST00000555935 POPDC3Q9HBV1 291 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 ARNT2Q9HBZ2 717 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 TM9SF3Q9HD45 589 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 CCDC177Q9NQR7 707 aaPredicted RBP7.7□□□□□ -1.18
CHD8-209ENST00000555935 OR12D3Q9UGF7 316 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 ZNF221Q9UK13 617 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 ERVW-1Q9UQF0 538 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 CARD8Q9Y2G2 431 aa7.7□□□□□ -1.18
CHD8-209ENST00000555935 ZFC3H1O60293 1989 aaKnown RBP7.7□□□□□ -1.18
CHD8-209ENST00000555935 SOWAHBA6NEL2 793 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 PPP6CO00743 305 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 PRMT5O14744 637 aaPredicted RBP7.69□□□□□ -1.18
CHD8-209ENST00000555935 MATN3O15232 486 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 HOXC11O43248 304 aaPredicted RBP7.69□□□□□ -1.18
CHD8-209ENST00000555935 TBX1O43435 398 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 HS6ST1O60243 411 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 NOBOXO60393 691 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 CCNKO75909 580 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 SIX3O95343 332 aaPredicted RBP7.69□□□□□ -1.18
CHD8-209ENST00000555935 CD4P01730 458 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 FYNP06241 537 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 FDXRP22570 491 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 CXCR2P25025 360 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 PSMB9P28065 219 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 PNPLA4P41247 253 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 DEFA1P59665 94 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 DEFA3P59666 94 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 LSM3P62310 102 aaKnown RBP7.69□□□□□ -1.18
CHD8-209ENST00000555935 IL5RAQ01344 420 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 CHRNEQ04844 493 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 TRAF3Q13114 568 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 E2F2Q14209 437 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 NPTX1Q15818 432 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 AGAP6Q5VW22 663 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 DCAF15Q66K64 600 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 PM20D1Q6GTS8 502 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 SPESP1Q6UW49 350 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 DLEU7Q6UYE1 221 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 HFE2Q6ZVN8 426 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 RALGPS2Q86X27 583 aaPredicted RBP7.69□□□□□ -1.18
CHD8-209ENST00000555935 HIPK1Q86Z02 1210 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 CCDC103Q8IW40 242 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 LINC01465Q8N7H1 131 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 NAT16Q8N8M0 369 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 ASCC1Q8N9N2 400 aaKnown RBP7.69□□□□□ -1.18
CHD8-209ENST00000555935 FLAD1Q8NFF5 587 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 EXT2Q93063 718 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 CELF6Q96J87 481 aaKnown RBP7.69□□□□□ -1.18
CHD8-209ENST00000555935 MRGPRX2Q96LB1 330 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 SPATA33Q96N06 139 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 AGAP4Q96P64 663 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 COLEC11Q9BWP8 271 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 MFSD1Q9H3U5 465 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 PIF1Q9H611 641 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 DDIT4Q9NX09 232 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 SLAMF8Q9P0V8 285 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 ERVK-18Q9QC07 812 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 SLCO3A1Q9UIG8 710 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 ANGPTL3Q9Y5C1 460 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 PABPN1LA6NDY0 278 aaKnown RBP7.69□□□□□ -1.18
CHD8-209ENST00000555935 METTL15A6NJ78 407 aa7.69□□□□□ -1.18
CHD8-209ENST00000555935 XPNPEP2O43895 674 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms