RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 PRAMEF17Q5VTA0 474 aa18.59■□□□□ 0.57
SUPT16H-203ENST00000555752 LRRTM4Q86VH4 590 aa18.59■□□□□ 0.57
SUPT16H-203ENST00000555752 TTC30BQ8N4P2 665 aa18.59■□□□□ 0.57
SUPT16H-203ENST00000555752 GPR150Q8NGU9 434 aa18.59■□□□□ 0.57
SUPT16H-203ENST00000555752 GLYATL1Q969I3 302 aa18.59■□□□□ 0.57
SUPT16H-203ENST00000555752 ZNF514Q96K75 400 aaPredicted RBP18.59■□□□□ 0.57
SUPT16H-203ENST00000555752 FCRL4Q96PJ5 515 aa18.59■□□□□ 0.57
SUPT16H-203ENST00000555752 RAB33BQ9H082 229 aa18.59■□□□□ 0.57
SUPT16H-203ENST00000555752 RPL26L1Q9UNX3 145 aaKnown RBP18.59■□□□□ 0.57
SUPT16H-203ENST00000555752 SLC5A6Q9Y289 635 aa18.59■□□□□ 0.57
SUPT16H-203ENST00000555752 ANKRD66B4E2M5 251 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 MATN3O15232 486 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 DDX3YO15523 660 aaKnown RBP18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 SCRG1O75711 98 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 TMEM63AO94886 807 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 MMP2P08253 660 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 PIRTP0C851 137 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 PDE1BQ01064 536 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 PLEKHN1Q494U1 663 aaPredicted RBP18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 CYB5D1Q6P9G0 228 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 ZNF517Q6ZMY9 492 aaPredicted RBP18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 RHOT1Q8IXI2 618 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 CISD2Q8N5K1 135 aaKnown RBP18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 UBXN4Q92575 508 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 PHF12Q96QT6 1004 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 ERGIC2Q96RQ1 377 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 TIMM29Q9BSF4 260 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 NUP62CLQ9H1M0 184 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 WASH6PQ9NQA3 447 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 LIMA1Q9UHB6 759 aaKnown RBP18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 SHOC2Q9UQ13 582 aa18.58■□□□□ 0.56
SUPT16H-203ENST00000555752 CROCCQ5TZA2 2017 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 RGSL1A5PLK6 1076 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 CPNE3O75131 537 aaKnown RBP18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 PRF1P14222 555 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 HNRNPH3P31942 346 aaKnown RBP18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 ACY1Q03154 408 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 CT47A1Q5JQC4 288 aaPredicted RBP18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 AGAP9Q5VTM2 703 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 IZUMO3Q5VZ72 239 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 NCBP2-AS2Q69YL0 99 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 ZNF571Q7Z3V5 609 aaPredicted RBP18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 C11orf96Q7Z7L8 435 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 TMEM126BQ8IUX1 230 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 ENDOVQ8N8Q3 282 aaKnown RBP18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 BTBD6Q96KE9 485 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 C5orf34Q96MH7 638 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 NUP85Q9BW27 656 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 TMPRSS11EQ9UL52 423 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 PCDHGB7Q9Y5F8 929 aa18.57■□□□□ 0.56
SUPT16H-203ENST00000555752 GPR89AB7ZAQ6 455 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 DDX3XO00571 662 aaKnown RBP eCLIP18.56■□□□□ 0.562e-50■■■□□ 19.1
SUPT16H-203ENST00000555752 CDK14O94921 469 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 JCHAINP01591 159 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 CCDC172P0C7W6 258 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 GPR89BP0CG08 455 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 IDSP22304 550 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 CA4P22748 312 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 FECHP22830 423 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 CES1P23141 567 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 CD86P42081 329 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 SLC25A11Q02978 314 aaKnown RBP18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 KRT81Q14533 505 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 E4F1Q66K89 784 aaPredicted RBP18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 PPP1R2P3Q6NXS1 205 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 FBXO38Q6PIJ6 1188 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 WASH2PQ6VEQ5 465 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 APTXQ7Z2E3 356 aaKnown RBP18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 LRRC49Q8IUZ0 686 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 RBM12BQ8IXT5 1001 aaKnown RBP18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 TEKT4Q8WW24 435 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 ZNF501Q96CX3 271 aaPredicted RBP18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 ZSCAN5AQ9BUG6 496 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 HAUS4Q9H6D7 363 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 ZFYVE1Q9HBF4 777 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 GPR83Q9NYM4 423 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 SNX7Q9UNH6 387 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 SCINQ9Y6U3 715 aa18.56■□□□□ 0.56
SUPT16H-203ENST00000555752 SSU72P8A0A1W2PR75 194 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 F5H423 210 aaPredicted RBP18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 ELAVL4P26378 380 aaKnown RBP18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 ARL4DP49703 201 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 HSD11B2P80365 405 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 ZRANB3Q5FWF4 1079 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 DNTTIP2Q5QJE6 756 aaKnown RBP18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 PLEKHS1Q5SXH7 462 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 TIGD7Q6NT04 549 aaPredicted RBP18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 BPHLQ86WA6 291 aaPredicted RBP18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 D2HGDHQ8N465 521 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 TRAM1L1Q8N609 369 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 ZBTB2Q8N680 514 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 PPM1MQ96MI6 270 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 SMAD5Q99717 465 aaKnown RBP18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 TCFL5Q9UL49 500 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 PSMD13Q9UNM6 376 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 SPTBP11277 2137 aa18.55■□□□□ 0.56
SUPT16H-203ENST00000555752 ANKUB1A6NFN9 424 aa18.54■□□□□ 0.56
SUPT16H-203ENST00000555752 LRRC53A6NM62 1247 aa18.54■□□□□ 0.56
SUPT16H-203ENST00000555752 MEN1O00255 615 aa18.54■□□□□ 0.56
SUPT16H-203ENST00000555752 CCNCP24863 283 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms