RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 A0A1W2PQF6 199 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 KANSL1LA0AUZ9 987 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 NPIPB15A6NHN6 443 aaPredicted RBP3.21□□□□□ -1.9
SNX6-204ENST00000555541 EIF4E1BA6NMX2 242 aaKnown RBP3.21□□□□□ -1.9
SNX6-204ENST00000555541 ATP2A1O14983 1001 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 SLC22A2O15244 555 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 MLYCDO95822 493 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 UBL4AP11441 157 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 CEACAM1P13688 526 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 MSH3P20585 1137 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 ZBED6P86452 979 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 TMEM115Q12893 351 aaPredicted RBP3.21□□□□□ -1.9
SNX6-204ENST00000555541 CDC16Q13042 620 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 SOWAHCQ53LP3 525 aaPredicted RBP3.21□□□□□ -1.9
SNX6-204ENST00000555541 TCTE1Q5JU00 501 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 FAAP20Q6NZ36 180 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 LONP2Q86WA8 852 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 TSPYL6Q8N831 410 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 SLC38A9Q8NBW4 561 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 RDM1Q8NG50 284 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 METTL6Q8TCB7 284 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 HM13Q8TCT9 377 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 SMARCE1Q969G3 411 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 ZUFSPQ96AP4 578 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 OXNAD1Q96HP4 312 aaPredicted RBP3.21□□□□□ -1.9
SNX6-204ENST00000555541 SMC6Q96SB8 1091 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 PIGMQ9H3S5 423 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 ZBTB20Q9HC78 741 aaPredicted RBP3.21□□□□□ -1.9
SNX6-204ENST00000555541 RANGRFQ9HD47 186 aaPredicted RBP3.21□□□□□ -1.9
SNX6-204ENST00000555541 BARHL2Q9NY43 387 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 JRKLQ9Y4A0 524 aa3.21□□□□□ -1.9
SNX6-204ENST00000555541 H0YIN7 160 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 KCNK5O95279 499 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 NR3C1P04150 777 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 ICAM1P05362 532 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 GATA1P15976 413 aaPredicted RBP3.2□□□□□ -1.9
SNX6-204ENST00000555541 DPEP1P16444 411 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 GATA2P23769 480 aaPredicted RBP3.2□□□□□ -1.9
SNX6-204ENST00000555541 MAP2K2P36507 400 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 PRCPP42785 496 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 MRPS34P82930 218 aaKnown RBP3.2□□□□□ -1.9
SNX6-204ENST00000555541 CEBPZQ03701 1054 aaKnown RBP3.2□□□□□ -1.9
SNX6-204ENST00000555541 CSTF3Q12996 717 aaKnown RBP3.2□□□□□ -1.9
SNX6-204ENST00000555541 PACS1Q6VY07 963 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 SEPT14Q6ZU15 432 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 SDCCAG8Q86SQ7 713 aaPredicted RBP3.2□□□□□ -1.9
SNX6-204ENST00000555541 BMPERQ8N8U9 685 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 RRP36Q96EU6 259 aaKnown RBP3.2□□□□□ -1.9
SNX6-204ENST00000555541 EGLN2Q96KS0 407 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 RBM4BQ9BQ04 359 aaKnown RBP3.2□□□□□ -1.9
SNX6-204ENST00000555541 CABLES2Q9BTV7 478 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 CCDC177Q9NQR7 707 aaPredicted RBP3.2□□□□□ -1.9
SNX6-204ENST00000555541 CWC15Q9P013 229 aaKnown RBP3.2□□□□□ -1.9
SNX6-204ENST00000555541 FBXW11Q9UKB1 542 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 CRYL1Q9Y2S2 319 aa3.2□□□□□ -1.9
SNX6-204ENST00000555541 TMEM184BQ9Y519 407 aaPredicted RBP3.2□□□□□ -1.9
SNX6-204ENST00000555541 A6NLC8 198 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 DAB1O75553 588 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 SLC25A12O75746 678 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 IPO7O95373 1038 aaKnown RBP3.19□□□□□ -1.9
SNX6-204ENST00000555541 TFAP2AP05549 437 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 IGHV4-38-2P0DP08 117 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 CTSCP53634 463 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 TUBB2AQ13885 445 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 ZRSR2Q15696 482 aaKnown RBP3.19□□□□□ -1.9
SNX6-204ENST00000555541 ADIPOQQ15848 244 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 TMEM95Q3KNT9 176 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 KIAA1644Q3SXP7 199 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 RASGEF1CQ8N431 466 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 GBGT1Q8N5D6 347 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 SLC5A8Q8N695 610 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 EMC1Q8N766 993 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 AMER3Q8N944 861 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 ANKRD52Q8NB46 1076 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 TMEM116Q8NCL8 245 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 DDHD1Q8NEL9 900 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 PPP4R1Q8TF05 950 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 SEPT5Q99719 369 aaPredicted RBP3.19□□□□□ -1.9
SNX6-204ENST00000555541 SEMA3CQ99985 751 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 SLX1AQ9BQ83 275 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 TUBB2BQ9BVA1 445 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 TMEM39BQ9GZU3 492 aa3.19□□□□□ -1.9
SNX6-204ENST00000555541 APOBEC3GQ9HC16 384 aaKnown RBP3.19□□□□□ -1.9
SNX6-204ENST00000555541 MRPS28Q9Y2Q9 187 aaKnown RBP3.19□□□□□ -1.9
SNX6-204ENST00000555541 TDRD15B5MCY1 1934 aaKnown RBP3.19□□□□□ -1.9
SNX6-204ENST00000555541 DUXAA6NLW8 204 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 E9PQ18 207 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 SH2B2O14492 632 aaPredicted RBP3.18□□□□□ -1.9
SNX6-204ENST00000555541 MAP2K7O14733 419 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 CLIC2O15247 247 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 DCXO43602 365 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 SYNCRIPO60506 623 aaKnown RBP3.18□□□□□ -1.9
SNX6-204ENST00000555541 NADKO95544 446 aaPredicted RBP3.18□□□□□ -1.9
SNX6-204ENST00000555541 LIPFP07098 398 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 HOXA13P31271 388 aaPredicted RBP3.18□□□□□ -1.9
SNX6-204ENST00000555541 PBX3P40426 434 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 TAS2R40P59535 323 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 DUOXA1Q1HG43 343 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 ASPRV1Q53RT3 343 aa3.18□□□□□ -1.9
SNX6-204ENST00000555541 LRIF1Q5T3J3 769 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms