RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 CLPTM1O96005 669 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 NGFP01138 241 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 LIPFP07098 398 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 PLA2G4BP0C869 781 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 LIFP15018 202 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 UBA1P22314 1058 aaKnown RBP2.6□□□□□ -1.99
SRP54-207ENST00000555535 NR2F2P24468 414 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 CPOXP36551 454 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 PIP4K2AP48426 406 aaPredicted RBP2.6□□□□□ -1.99
SRP54-207ENST00000555535 TRA2BP62995 288 aaKnown RBP2.6□□□□□ -1.99
SRP54-207ENST00000555535 RPP30P78346 268 aaKnown RBP2.6□□□□□ -1.99
SRP54-207ENST00000555535 PPARDQ03181 441 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 GALNT2Q10471 571 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 FOXD4Q12950 439 aaPredicted RBP2.6□□□□□ -1.99
SRP54-207ENST00000555535 CDC16Q13042 620 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 CDONQ4KMG0 1287 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 NSUN5P2Q63ZY6 315 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 PWWP2BQ6NUJ5 590 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 PACS1Q6VY07 963 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 RDM1Q8NG50 284 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 OR2L2Q8NH16 312 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 DNAAF4Q8WXU2 420 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 KIF1BPQ96EK5 621 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 ISCA1Q9BUE6 129 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 PLCXD1Q9NUJ7 323 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 PPP1R14DQ9NXH3 145 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 KCND2Q9NZV8 630 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 ABI3Q9P2A4 366 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 OR14J1Q9UGF5 321 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 HAO1Q9UJM8 370 aa2.6□□□□□ -1.99
SRP54-207ENST00000555535 ZNF646O15015 1829 aaPredicted RBP2.59□□□□□ -1.99
SRP54-207ENST00000555535 TEX13DA0A0J9YY54 714 aaPredicted RBP2.59□□□□□ -1.99
SRP54-207ENST00000555535 LRRC53A6NM62 1247 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 EIF3FO00303 357 aaPredicted RBP2.59□□□□□ -1.99
SRP54-207ENST00000555535 TNFSF14O43557 240 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 EML2O95834 649 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 IFIT1P09914 478 aaKnown RBP2.59□□□□□ -1.99
SRP54-207ENST00000555535 ZNF182P17025 639 aaPredicted RBP2.59□□□□□ -1.99
SRP54-207ENST00000555535 ITGA3P26006 1051 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 WNT5AP41221 380 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 GSTA3Q16772 222 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 DUOXA1Q1HG43 343 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 FAM166AQ6J272 317 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 LRRTM4Q86VH4 590 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 SLC39A11Q8N1S5 342 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 Q8N7P7 452 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 ZPLD1Q8TCW7 415 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 MRGPRDQ8TDS7 321 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 PSPC1Q8WXF1 523 aaKnown RBP2.59□□□□□ -1.99
SRP54-207ENST00000555535 MAELQ96JY0 434 aaKnown RBP2.59□□□□□ -1.99
SRP54-207ENST00000555535 PKP2Q99959 881 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 RHNO1Q9BSD3 238 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 CHST11Q9NPF2 352 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 COPG2Q9UBF2 871 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 GJD2Q9UKL4 321 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 SARDHQ9UL12 918 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 CAPN7Q9Y6W3 813 aa2.59□□□□□ -1.99
SRP54-207ENST00000555535 PI15O43692 258 aa2.58□□□□□ -2
SRP54-207ENST00000555535 PIP5K1CO60331 668 aa2.58□□□□□ -2
SRP54-207ENST00000555535 HNRNPA1P09651 372 aaKnown RBP eCLIP2.58□□□□□ -2
SRP54-207ENST00000555535 FRMD6-AS1P0C7T7 363 aa2.58□□□□□ -2
SRP54-207ENST00000555535 FAM157CP0CG43 387 aa2.58□□□□□ -2
SRP54-207ENST00000555535 ANXA7P20073 488 aaKnown RBP2.58□□□□□ -2
SRP54-207ENST00000555535 EPHA2P29317 976 aa2.58□□□□□ -2
SRP54-207ENST00000555535 ABCD1P33897 745 aa2.58□□□□□ -2
SRP54-207ENST00000555535 NKX2-1P43699 371 aaPredicted RBP2.58□□□□□ -2
SRP54-207ENST00000555535 SP3Q02447 781 aa2.58□□□□□ -2
SRP54-207ENST00000555535 PTP4A2Q12974 167 aa2.58□□□□□ -2
SRP54-207ENST00000555535 RASGEF1CQ8N431 466 aa2.58□□□□□ -2
SRP54-207ENST00000555535 ZNF611Q8N823 705 aa2.58□□□□□ -2
SRP54-207ENST00000555535 OR1J2Q8NGS2 313 aa2.58□□□□□ -2
SRP54-207ENST00000555535 GTF3C6Q969F1 213 aa2.58□□□□□ -2
SRP54-207ENST00000555535 RTP3Q9BQQ7 232 aa2.58□□□□□ -2
SRP54-207ENST00000555535 STK39Q9UEW8 545 aa2.58□□□□□ -2
SRP54-207ENST00000555535 CNOT8Q9UFF9 292 aaKnown RBP2.58□□□□□ -2
SRP54-207ENST00000555535 RARRES3Q9UL19 164 aa2.58□□□□□ -2
SRP54-207ENST00000555535 MKLN1Q9UL63 735 aa2.58□□□□□ -2
SRP54-207ENST00000555535 MOB4Q9Y3A3 225 aa2.58□□□□□ -2
SRP54-207ENST00000555535 CLIC4Q9Y696 253 aa2.58□□□□□ -2
SRP54-207ENST00000555535 SOS1Q07889 1333 aaPredicted RBP2.58□□□□□ -2
SRP54-207ENST00000555535 TTC36A6NLP5 189 aa2.57□□□□□ -2
SRP54-207ENST00000555535 TSPAN4O14817 238 aa2.57□□□□□ -2
SRP54-207ENST00000555535 BUD23O43709 281 aaKnown RBP2.57□□□□□ -2
SRP54-207ENST00000555535 TRMUO75648 421 aaKnown RBP2.57□□□□□ -2
SRP54-207ENST00000555535 NKX2-2O95096 273 aa2.57□□□□□ -2
SRP54-207ENST00000555535 CEBPBP17676 345 aa2.57□□□□□ -2
SRP54-207ENST00000555535 CNTFP26441 200 aa2.57□□□□□ -2
SRP54-207ENST00000555535 MMP15P51511 669 aa2.57□□□□□ -2
SRP54-207ENST00000555535 SNX16P57768 344 aa2.57□□□□□ -2
SRP54-207ENST00000555535 PPFIA1Q13136 1202 aa2.57□□□□□ -2
SRP54-207ENST00000555535 OLIG2Q13516 323 aa2.57□□□□□ -2
SRP54-207ENST00000555535 GPR68Q15743 365 aa2.57□□□□□ -2
SRP54-207ENST00000555535 GTDC1Q4AE62 458 aa2.57□□□□□ -2
SRP54-207ENST00000555535 NAA35Q5VZE5 725 aa2.57□□□□□ -2
SRP54-207ENST00000555535 PM20D2Q8IYS1 436 aa2.57□□□□□ -2
SRP54-207ENST00000555535 SLC5A8Q8N695 610 aa2.57□□□□□ -2
SRP54-207ENST00000555535 SLC38A9Q8NBW4 561 aa2.57□□□□□ -2
SRP54-207ENST00000555535 HM13Q8TCT9 377 aa2.57□□□□□ -2
SRP54-207ENST00000555535 HARBI1Q96MB7 349 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms