RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 SMAD1Q15797 465 aaKnown RBP9.78□□□□□ -0.84
PSEN1-213ENST00000555386 ENPP7Q6UWV6 458 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 FAM151BQ6UXP7 276 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 KYAT3Q6YP21 454 aaKnown RBP9.78□□□□□ -0.84
PSEN1-213ENST00000555386 FAM47EQ6ZV65 393 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 ASRGL1Q7L266 308 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 ABI3BPQ7Z7G0 1075 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 LINC00523Q86TU6 105 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 HEATR4Q86WZ0 1026 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 SLC22A18ASQ8N1D0 253 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 TTC30BQ8N4P2 665 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 DENND6BQ8NEG7 585 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 OR4K2Q8NGD2 314 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 GSDMBQ8TAX9 411 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 ASB12Q8WXK4 309 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 MRRFQ96E11 262 aaKnown RBP9.78□□□□□ -0.84
PSEN1-213ENST00000555386 RMDN2Q96LZ7 410 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 LRRC37BQ96QE4 947 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 EBNA1BP2Q99848 306 aaKnown RBP9.78□□□□□ -0.84
PSEN1-213ENST00000555386 NAT9Q9BTE0 207 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 LGR4Q9BXB1 951 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 WDR26Q9H7D7 661 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 TMEM9BQ9NQ34 198 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 PKP3Q9Y446 797 aa9.78□□□□□ -0.84
PSEN1-213ENST00000555386 ARHGEF17Q96PE2 2063 aaPredicted RBP9.77□□□□□ -0.84
PSEN1-213ENST00000555386 ARID1BQ8NFD5 2236 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 FAM159BA6NKW6 160 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 ERI2A8K979 691 aaKnown RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 CACNB4O00305 520 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 GPR39O43194 453 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 MAGEC1O60732 1142 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 LRP3O75074 770 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 AVILO75366 819 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 UNC5CO95185 931 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 CRTAMO95727 393 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 LPOP22079 712 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 ADRA1DP25100 572 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 CTSKP43235 329 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 ETV4P43268 484 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 RASSF2P50749 326 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 MNAT1P51948 309 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 MGAT5Q09328 741 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 CDH17Q12864 832 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 TAF1AQ15573 450 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 DBN1Q16643 649 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 ZNF648Q5T619 568 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 STEAP4Q687X5 459 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 CASC4Q6P4E1 433 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 ZNF449Q6P9G9 518 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 ZNF534Q76KX8 674 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 MARK2Q7KZI7 788 aaKnown RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 OTOAQ7RTW8 1153 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 GATAD2AQ86YP4 633 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 HID1Q8IV36 788 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 AGGF1Q8N302 714 aaeCLIP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 CBARPQ8N350 705 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 OR13C4Q8NGS5 318 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 RAB3IL1Q8TBN0 382 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 BRSK1Q8TDC3 778 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 C10orf82Q8WW14 230 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 INPP5DQ92835 1189 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 TSACCQ96A04 125 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 FUBP1Q96AE4 644 aaKnown RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 KLHL29Q96CT2 875 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 CFAP36Q96G28 342 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 DNAJC1Q96KC8 554 aaKnown RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 SIGLEC10Q96LC7 697 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 RAB3IPQ96QF0 476 aaPredicted RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 SRPK1Q96SB4 655 aaKnown RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 FAM96AQ9H5X1 160 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 MANSC1Q9H8J5 431 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 MRPL40Q9NQ50 206 aaKnown RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 HACD3Q9P035 362 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 FKBPLQ9UIM3 349 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 TMEM98Q9Y2Y6 226 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 SPTBN4Q9H254 2564 aa9.77□□□□□ -0.85
PSEN1-213ENST00000555386 ZFC3H1O60293 1989 aaKnown RBP9.77□□□□□ -0.85
PSEN1-213ENST00000555386 SPTBN2O15020 2390 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 PLXNB3Q9ULL4 1909 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 TMEM202A6NGA9 273 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 FADS2P1A8MWK0 482 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 COPEO14579 308 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 UGT1A9O60656 530 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 CER1O95813 267 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 UGT1A6P19224 532 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 UGT1A1P22309 533 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 UGT1A4P22310 534 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 MGAT1P26572 445 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 HTR1BP28222 390 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 UGT1A3P35503 534 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 UGT1A5P35504 534 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 POLD2P49005 469 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 PFN3P60673 137 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 BNIP3Q12983 259 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 C1orf61Q13536 156 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 PTK2BQ14289 1009 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 FZD2Q14332 565 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 NFATC4Q14934 902 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 CHRNA6Q15825 494 aa9.76□□□□□ -0.85
PSEN1-213ENST00000555386 STPG1Q5TH74 334 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms