RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 H7C0S8 307 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 ZNF185O15231 689 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 TPSB2P20231 275 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 GRIA1P42261 906 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 FASLGP48023 281 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 OR1D5P58170 312 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 PRAMEP78395 509 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 XIAPP98170 497 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 TPSAB1Q15661 275 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 CYP1B1Q16678 543 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 KIF26BQ2KJY2 2108 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 TTC27Q6P3X3 843 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 IYDQ6PHW0 289 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 AFTPHQ6ULP2 937 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 ZNF438Q7Z4V0 828 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 C17orf82Q86X59 251 aaPredicted RBP11.91□□□□□ -0.5
SRP54-206ENST00000555317 ZNF547Q8IVP9 402 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 OR6P1Q8NGX9 317 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 OR10G6Q8NH81 332 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 CXorf40BQ96DE9 158 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 CDKN2AIPNLQ96HQ2 116 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 TMEM74Q96NL1 305 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 RANBP9Q96S59 729 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.91□□□□□ -0.5
SRP54-206ENST00000555317 IL22Q9GZX6 179 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 EPB41L5Q9HCM4 733 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 SARS2Q9NP81 518 aaKnown RBP11.91□□□□□ -0.5
SRP54-206ENST00000555317 TCAF1Q9Y4C2 921 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 PCDHB1Q9Y5F3 818 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 SAR1BQ9Y6B6 198 aa11.91□□□□□ -0.5
SRP54-206ENST00000555317 DNMT3AQ9Y6K1 912 aaPredicted RBP11.91□□□□□ -0.5
SRP54-206ENST00000555317 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 F8W8V4 182 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 NTN3O00634 580 aaPredicted RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 DUX1O43812 170 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 POP7O75817 140 aaKnown RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 CPNE6O95741 557 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 VIPP01282 170 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 ATP1B2P14415 290 aaPredicted RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 ACRV1P26436 265 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 RPL10P27635 214 aaKnown RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 PPARGP37231 505 aaPredicted RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 PAFAH1B1P43034 410 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 MAPK9P45984 424 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 NPY2RP49146 381 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 CTSCP53634 463 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 INHBCP55103 352 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 GABREP78334 506 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 GPLD1P80108 840 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 CYP4F3Q08477 520 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 CAMK2BQ13554 666 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 CLPPQ16740 277 aaPredicted RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 C3orf38Q5JPI3 329 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 AARS2Q5JTZ9 985 aaKnown RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 PCID2Q5JVF3 399 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 PHF19Q5T6S3 580 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 TSTD2Q5T7W7 516 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 LYPLAL1Q5VWZ2 237 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 CASC4Q6P4E1 433 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 ZNF449Q6P9G9 518 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 FOXR1Q6PIV2 292 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 PIM3Q86V86 326 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 SERPINA9Q86WD7 417 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 OTUD6BQ8N6M0 293 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 MDM1Q8TC05 714 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 PEX13Q92968 403 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 SGF29Q96ES7 293 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 ATXN7L3BQ96GX2 97 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 TMEM121BQ9BXQ6 578 aaPredicted RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 ZDHHC3Q9NYG2 299 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 AKAP7Q9P0M2 348 aaPredicted RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 SAMD15Q9P1V8 674 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 CPNE7Q9UBL6 633 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 FAM8A1Q9UBU6 413 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 SLC23A2Q9UGH3 650 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 ANAPC5Q9UJX4 755 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 RIMKLBQ9ULI2 386 aa11.9□□□□□ -0.5
SRP54-206ENST00000555317 ATXN7L1Q9ULK2 861 aaPredicted RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 URB1O60287 2271 aaKnown RBP11.9□□□□□ -0.5
SRP54-206ENST00000555317 WDFY3Q8IZQ1 3526 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 CCDC187A0A096LP49 1063 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 A0A1W2PQM1 296 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 EML2O95834 649 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 SLC35G4P0C7Q5 338 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 RBMS1P29558 406 aaKnown RBP11.89□□□□□ -0.51
SRP54-206ENST00000555317 DRG2P55039 364 aaKnown RBP11.89□□□□□ -0.51
SRP54-206ENST00000555317 NR1D2Q14995 579 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 BCL7AQ4VC05 210 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 FASTKD1Q53R41 847 aaKnown RBP11.89□□□□□ -0.51
SRP54-206ENST00000555317 AGAP9Q5VTM2 703 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 PAPD7Q5XG87 772 aaKnown RBP11.89□□□□□ -0.51
SRP54-206ENST00000555317 LRRC8BQ6P9F7 803 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 ZNF761Q86XN6 746 aaPredicted RBP11.89□□□□□ -0.51
SRP54-206ENST00000555317 LSMEM2Q8N112 164 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 BEND7Q8N7W2 519 aaPredicted RBP11.89□□□□□ -0.51
SRP54-206ENST00000555317 KDF1Q8NAX2 398 aaPredicted RBP11.89□□□□□ -0.51
SRP54-206ENST00000555317 HDAC10Q969S8 669 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 RUNDC3BQ96NL0 473 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 DPYSL5Q9BPU6 564 aa11.89□□□□□ -0.51
SRP54-206ENST00000555317 FOXP3Q9BZS1 431 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms