RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PJA1Q8NG27 643 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SDCCAG3Q96C92 435 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SLC39A13Q96H72 371 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 CHID1Q9BWS9 393 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 ZYG11BQ9C0D3 744 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 TPK1Q9H3S4 243 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 ATP13A3Q9H7F0 1226 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 CYP4F12Q9HCS2 524 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 GMPR2Q9P2T1 348 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 WARS2Q9UGM6 360 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 PCDHB3Q9Y5E6 796 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 MN1Q10571 1320 aaPredicted RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 A0A1W2PQH9 124 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 ZNF99A8MXY4 864 aaPredicted RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 TMEM189-UBE2V1I3L0A0 370 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 UBFD1O14562 309 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 AZIN1O14977 448 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SEPT4O43236 478 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SLC7A4O43246 635 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 GMNNO75496 209 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 KCNH1O95259 989 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 HTR1BP28222 390 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SERPINB1P30740 379 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SHMT2P34897 504 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 TBX4P57082 545 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 EMX2Q04743 252 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 RPS6KA2Q15349 733 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 UNC50Q53HI1 259 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 MARC1Q5VT66 337 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 PRR23CQ6ZRP0 262 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 CHST15Q7LFX5 561 aaPredicted RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 C14orf80Q86SX3 495 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SLCO6A1Q86UG4 719 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 ZNF598Q86UK7 904 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SCN4BQ8IWT1 228 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 ZCCHC7Q8N3Z6 543 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 OR7A2PQ8NGA2 310 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 OR6Q1Q8NGQ2 317 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 SLC22A17Q8WUG5 538 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 TWIST2Q8WVJ9 160 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 BIRC7Q96CA5 298 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 LRCH3Q96II8 777 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 NSMCE2Q96MF7 247 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 NMUR1Q9HB89 426 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 FBRSL1Q9HCM7 1045 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 TMEM248Q9NWD8 314 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 DNMT3BQ9UBC3 853 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 ATP11BQ9Y2G3 1177 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 UGT2A1Q9Y4X1 527 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 DNAJC15Q9Y5T4 150 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 MICAL3Q7RTP6 2002 aa10.59□□□□□ -0.71
MTHFD1-210ENST00000555252 M0QX08 132 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 NDUFS2O75306 463 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 MYO1DO94832 1006 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 OAZ2O95190 189 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 EOMESO95936 686 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 MOCS2O96007 188 aaPredicted RBP10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 PRR35P0CG20 571 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 MAGEA11P43364 429 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 RFX4Q33E94 735 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 FAM98BQ52LJ0 330 aaKnown RBP10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 CST9Q5W186 159 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 CLEC6AQ6EIG7 209 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 LGI2Q8N0V4 545 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 TEX26Q8N6G2 289 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF784Q8NCA9 323 aaPredicted RBP10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 CHDHQ8NE62 594 aaPredicted RBP10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 HASPINQ8TF76 798 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 CCDC97Q96F63 343 aaPredicted RBP10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 ZNF419Q96HQ0 510 aaPredicted RBP10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 C3orf30Q96M34 536 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 NUSAP1Q9BXS6 441 aaKnown RBP10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 LRRC3Q9BY71 257 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 ADNPQ9H2P0 1102 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 IL1RL2Q9HB29 575 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 POPDC3Q9HBV1 291 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 PRDM5Q9NQX1 630 aaPredicted RBP10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 OLA1Q9NTK5 396 aaKnown RBP10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 SLC2A6Q9UGQ3 507 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 GPR45Q9Y5Y3 372 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 NLRC5Q86WI3 1866 aa10.58□□□□□ -0.72
MTHFD1-210ENST00000555252 SAGE2PA6NJ88 616 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 M0R3G1 203 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 UPK1AO00322 258 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 IFRD1O00458 451 aaPredicted RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 NUAK1O60285 661 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ADAMTS4O75173 837 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 NDST3O95803 873 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 PEX11BO96011 259 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 MTHFD1P11586 935 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 PCMT1P22061 227 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 RYKP34925 604 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 PPP5CP53041 499 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 ECT2LQ008S8 904 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 SELENBP1Q13228 472 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 CAPRIN1Q14444 709 aaKnown RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 HIST2H2ACQ16777 129 aaPredicted RBP10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 SLC39A12Q504Y0 691 aa10.57□□□□□ -0.72
MTHFD1-210ENST00000555252 GLB1LQ6UWU2 654 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms