RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 ASF1AQ9Y294 204 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 LTBP1Q14766 1721 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 ABHD14A-ACY1A0A1B0GW23 586 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 HMX2A2RU54 273 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 ECI2O75521 394 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 IRS1P35568 1242 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 RPIAP49247 311 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 DGKQP52824 942 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 WDR5P61964 334 aaKnown RBP12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 CCDC15Q0P6D6 951 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 SCAPQ12770 1279 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 PLEKHG6Q3KR16 790 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 LIN52Q52LA3 116 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 WASHC2DQ5SRD0 308 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 CLYBLQ8N0X4 340 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 UMODL1-AS1Q8N2C9 162 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 PGBD5Q8N414 524 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 ANKLE1Q8NAG6 615 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 INPP5DQ92835 1189 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 IL12RB2Q99665 862 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 BRD9Q9H8M2 597 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 MTRRQ9UBK8 725 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 RAD54BQ9Y620 910 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 ZNFX1Q9P2E3 1918 aaKnown RBP12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 TIPRLO75663 272 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 MYO1DO94832 1006 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 DIO3P55073 304 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 NAB1Q13506 487 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 SPDYE7PQ495Y7 208 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 FAM180BQ6P0A1 224 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 NKAPQ8N5F7 415 aaKnown RBP12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 PNPLA8Q9NP80 782 aa12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 IMP3Q9NV31 184 aaKnown RBP12.1□□□□□ -0.47
ARHGEF40-206ENST00000555232 TBC1D3DA0A087WVF3 549 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TBC1D3IA0A087WXS9 549 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TBC1D3EA0A087X179 549 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TBC1D3KA0A087X1G2 549 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 ILVBLA1L0T0 632 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 CNOT1A5YKK6 2376 aaKnown RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TBC1D3FA6NER0 549 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TBC1D3LB9A6J9 549 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 HNRNPCL1O60812 293 aaKnown RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 SNRPB2P08579 225 aaKnown RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TBC1D3HP0C7X1 549 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 DGKGP49619 791 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 POLR2LP62875 67 aaKnown RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TRMT5Q32P41 509 aaKnown RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 XKR6Q5GH73 641 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TBC1D3GQ6DHY5 549 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TBC1D3CQ6IPX1 549 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TBC1D3Q8IZP1 549 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 SIKE1Q9BRV8 207 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 FAM83DQ9H4H8 585 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 LIMD1Q9UGP4 676 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 VPS4AQ9UN37 437 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 EIF3LQ9Y262 564 aaKnown RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 MGAT4DA6NG13 374 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TTC34A8MYJ7 566 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 ANXA5P08758 320 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 DGKAP23743 735 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TIE1P35590 1138 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 PRKAG1P54619 331 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 ZBTB49Q6ZSB9 765 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 RELL1Q8IUW5 271 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 RBFAQ8N0V3 343 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 ZNF786Q8N393 782 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 RIOK2Q9BVS4 552 aaKnown RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 SLC46A2Q9BY10 475 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 FAM192AQ9GZU8 254 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 RERGLQ9H628 205 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 GID8Q9NWU2 228 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 B4GALT6Q9UBX8 382 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TMCO1Q9UM00 188 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 TPRP12270 2363 aaKnown RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 PITPNM1O00562 1244 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 PRAMEF12O95522 483 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 ETV3P41162 512 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 PLCL1Q15111 1095 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 IL23RQ5VWK5 629 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 CHST15Q7LFX5 561 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 SPPL2CQ8IUH8 684 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 ADGRG2Q8IZP9 1017 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 SLC7A6OSQ96CW6 309 aaPredicted RBP12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 MIPEPQ99797 713 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 OSBPL6Q9BZF3 934 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 ALG2Q9H553 416 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 CCDC134Q9H6E4 229 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 DGKBQ9Y6T7 804 aa12.09□□□□□ -0.47
ARHGEF40-206ENST00000555232 PCCBP05166 539 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 VCLP18206 1134 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 HNF1BP35680 557 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 ETV4P43268 484 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 MAGEA11P43364 429 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 MAPK9P45984 424 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 DSG1Q02413 1049 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 SMARCB1Q12824 385 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 CAMK2GQ13555 558 aaPredicted RBP12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 TAZQ16635 292 aa12.08□□□□□ -0.47
ARHGEF40-206ENST00000555232 CACHD1Q5VU97 1274 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms