RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 H0Y858 1186 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 SMNDC1O75940 238 aaKnown RBP eCLIP17.21■□□□□ 0.35
SHOX-204ENST00000554971 VAPBO95292 243 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 IGLV3-19P01714 112 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 DNTTP04053 509 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 COX4I1P13073 169 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 C5AR1P21730 350 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 GABRB3P28472 473 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 GRIA4P48058 902 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 CD151P48509 253 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 AP1S1P61966 158 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 ITKQ08881 620 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 CNTN1Q12860 1018 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 TRAF2Q12933 501 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 KLF10Q13118 480 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 SRSF5Q13243 272 aaKnown RBP17.21■□□□□ 0.35
SHOX-204ENST00000554971 LAMB3Q13751 1172 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 GSTA3Q16772 222 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 SH2D4BQ5SQS7 431 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 AGBL4Q5VU57 503 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 PARS2Q7L3T8 475 aaKnown RBP17.21■□□□□ 0.35
SHOX-204ENST00000554971 NRG4Q8WWG1 115 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 TADA1Q96BN2 335 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 FAM136AQ96C01 138 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 ECHDC3Q96DC8 303 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 IMP4Q96G21 291 aaKnown RBP17.21■□□□□ 0.35
SHOX-204ENST00000554971 KLHL32Q96NJ5 620 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 ZNF184Q99676 751 aaPredicted RBP17.21■□□□□ 0.35
SHOX-204ENST00000554971 MRPL46Q9H2W6 279 aaKnown RBP17.21■□□□□ 0.35
SHOX-204ENST00000554971 VCX3BQ9H321 246 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 SCUBE2Q9NQ36 999 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 FBXL12Q9NXK8 326 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 PRPF19Q9UMS4 504 aaKnown RBP17.21■□□□□ 0.35
SHOX-204ENST00000554971 CYP8B1Q9UNU6 501 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 INVSQ9Y283 1065 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 CACNA1EQ15878 2313 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 FAM95CA0A1B0GW59 222 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 RGSL1A5PLK6 1076 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 MT-CYBP00156 380 aaPredicted RBP17.21■□□□□ 0.35
SHOX-204ENST00000554971 TFEBP19484 476 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 P2RY2P41231 377 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 CD86P42081 329 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 XIAPP98170 497 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 HERC3Q15034 1050 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 PIP5KL1Q5T9C9 394 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 LRRC8EQ6NSJ5 796 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 GDPD4Q6W3E5 623 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 PIWIL4Q7Z3Z4 852 aaKnown RBP17.21■□□□□ 0.35
SHOX-204ENST00000554971 WDR5BQ86VZ2 330 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 FSTL5Q8N475 847 aaPredicted RBP17.21■□□□□ 0.35
SHOX-204ENST00000554971 RP9Q8TA86 221 aaKnown RBP17.21■□□□□ 0.35
SHOX-204ENST00000554971 FAR2Q96K12 515 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 SCYL1Q96KG9 808 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 MRGPRX2Q96LB1 330 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 SUV39H2Q9H5I1 410 aa17.21■□□□□ 0.35
SHOX-204ENST00000554971 IGHV1OR15-9A0A0B4J2B8 117 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 C1QTNF3-AMACRE9PGA6 284 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 SPINT1O43278 529 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 HTRA2O43464 458 aaPredicted RBP17.2■□□□□ 0.34
SHOX-204ENST00000554971 SBK3P0C264 359 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 ITGB7P26010 798 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 ACSL1P33121 698 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 SLC26A3P40879 764 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 ABL2P42684 1182 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 SLC12A2P55011 1212 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 SESN3P58005 492 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 SLC25A3Q00325 362 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 POU6F1Q14863 301 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 ZNF805Q5CZA5 627 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 FAM46CQ5VWP2 391 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 NEPROQ6NW34 567 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 ESRP1Q6NXG1 681 aaKnown RBP17.2■□□□□ 0.34
SHOX-204ENST00000554971 HDDC3Q8N4P3 179 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 TSPAN17Q96FV3 270 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 GPR78Q96P69 363 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 TUBGCP5Q96RT8 1024 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 SERPINI1Q99574 410 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 OSBPL1AQ9BXW6 950 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 FAM126AQ9BYI3 521 aaPredicted RBP17.2■□□□□ 0.34
SHOX-204ENST00000554971 VCXQ9H320 206 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 ATP13A3Q9H7F0 1226 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 S100A14Q9HCY8 104 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 NCKIPSDQ9NZQ3 722 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 BCAP29Q9UHQ4 241 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 MBD1Q9UIS9 605 aaPredicted RBP17.2■□□□□ 0.34
SHOX-204ENST00000554971 FBXO5Q9UKT4 447 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 SCML1Q9UN30 329 aa17.2■□□□□ 0.34
SHOX-204ENST00000554971 TNRC6BQ9UPQ9 1833 aaKnown RBP17.2■□□□□ 0.34
SHOX-204ENST00000554971 TRPC5OSA6NMA1 111 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 C16orf96A6NNT2 1141 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 RNASEH2AO75792 299 aaKnown RBP17.19■□□□□ 0.34
SHOX-204ENST00000554971 PDHA1P08559 390 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 ACADMP11310 421 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 ARNTP27540 789 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 TAS2R38P59533 333 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 RAD51Q06609 339 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 SLC14A2Q15849 920 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 ARL13AQ5H913 290 aaPredicted RBP17.19■□□□□ 0.34
SHOX-204ENST00000554971 RALGPS1Q5JS13 557 aa17.19■□□□□ 0.34
SHOX-204ENST00000554971 LRRC73Q5JTD7 316 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms