RNA–Protein interactions for RNA: ENST00000554768.5

MTHFD1-209, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-209ENST00000554768 KIFC1Q9BW19 673 aa12.71□□□□□ -0.37
MTHFD1-209ENST00000554768 TMEM121BQ9BXQ6 578 aaPredicted RBP12.71□□□□□ -0.37
MTHFD1-209ENST00000554768 TREX1Q9NSU2 369 aa12.71□□□□□ -0.37
MTHFD1-209ENST00000554768 SYBUQ9NX95 663 aa12.71□□□□□ -0.37
MTHFD1-209ENST00000554768 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.71□□□□□ -0.37
MTHFD1-209ENST00000554768 CLCA2Q9UQC9 943 aa12.71□□□□□ -0.37
MTHFD1-209ENST00000554768 DNAJC16Q9Y2G8 782 aa12.71□□□□□ -0.37
MTHFD1-209ENST00000554768 EPG5Q9HCE0 2579 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 A0A1W2PQM1 296 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 CCDC188H7C350 402 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 NTN3O00634 580 aaPredicted RBP12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 RALBP11234 206 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 ATP1B2P14415 290 aaPredicted RBP12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 IDSP22304 550 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 ACRV1P26436 265 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 FOXN2P32314 431 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 FASLGP48023 281 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 CCL7P80098 99 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 DR1Q01658 176 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 DMPKQ09013 629 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 NR1D2Q14995 579 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 DBN1Q16643 649 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 BCL7AQ4VC05 210 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 AGAP9Q5VTM2 703 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 ARMC3Q5W041 872 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 ABRAXAS1Q6UWZ7 409 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 WASH2PQ6VEQ5 465 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 SYDE1Q6ZW31 735 aaPredicted RBP12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 PPIL6Q8IXY8 311 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 CLDN19Q8N6F1 224 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 BEND7Q8N7W2 519 aaPredicted RBP12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 Q8N9G6 341 aaPredicted RBP12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 OR6P1Q8NGX9 317 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 OR4L1Q8NH43 312 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 WDR48Q8TAF3 677 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 SLC37A2Q8TED4 501 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 GATA6Q92908 595 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 LINC00615Q96LM1 132 aaPredicted RBP12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 XAB2Q9HCS7 855 aaKnown RBP12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 WASH6PQ9NQA3 447 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 SCHIP1Q9P0W5 487 aaPredicted RBP12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 SCN8AQ9UQD0 1980 aa12.7□□□□□ -0.38
MTHFD1-209ENST00000554768 ASXL3Q9C0F0 2248 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 KIR2DS5A0A0G2JLQ3 304 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 A0A0G2JNG1 304 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 MAGEB16A2A368 324 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 SDR42E2A6NKP2 422 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 OR5K4A6NMS3 321 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 RHPN2P1A8MT19 583 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 CFAP99D6REC4 459 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 GOLGA8MH3BSY2 632 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 KIR2DS3K7RE56 304 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 TCEA3O75764 348 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 GOT2P00505 430 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 RPLP0P05388 317 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 BRAFP15056 766 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 VCLP18206 1134 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 XRCC1P18887 633 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 RPL10P27635 214 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 NMBRP28336 390 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 MAGEA3P43357 314 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 GPR3P46089 330 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 OR1D5P58170 312 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 KIR2DS5Q14953 304 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 RNASEH2BQ5TBB1 312 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 METRNLQ641Q3 311 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 AFTPHQ6ULP2 937 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 CES3Q6UWW8 571 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 XKR5Q6UX68 686 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 FAM83HQ6ZRV2 1179 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 SPRED1Q7Z699 444 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 CCNJLQ8IV13 435 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 MPP5Q8N3R9 675 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 SPATA4Q8NEY3 305 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 OR2L2Q8NH16 312 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 RUNDC3BQ96NL0 473 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 SERPINB12Q96P63 405 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 LRRN3Q9H3W5 708 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 OSGEPL1Q9H4B0 414 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 MRM3Q9HC36 420 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 SARS2Q9NP81 518 aaKnown RBP12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 ZNF624Q9P2J8 865 aaPredicted RBP12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 ASIC3Q9UHC3 531 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 SOX13Q9UN79 622 aa12.69□□□□□ -0.38
MTHFD1-209ENST00000554768 KNTC1P50748 2209 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 KLHL33A6NCF5 533 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 TRABD2BA6NFA1 517 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 MGAT4DA6NG13 374 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 PDZK1P1A8MUH7 402 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 DNALI1O14645 258 aaPredicted RBP12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 SLC2A4P14672 509 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 ARNTP27540 789 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 CD1CP29017 333 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 ALDH4A1P30038 563 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 PRLHRP49683 370 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 DRG2P55039 364 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 UBE2IP63279 158 aaKnown RBP12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 PRAMEP78395 509 aa12.68□□□□□ -0.38
MTHFD1-209ENST00000554768 BIRC2Q13490 618 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms