RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 SNAP47Q5SQN1 464 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 FNBP1LQ5T0N5 605 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 KCTD11Q693B1 232 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 DENND5AQ6IQ26 1287 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 TAS2R42Q7RTR8 314 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 TMPRSS9Q7Z410 1059 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 PRUNE1Q86TP1 453 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 AMZ2Q86W34 360 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 ZNF547Q8IVP9 402 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 RASGEF1AQ8N9B8 481 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 AVL9Q8NBF6 648 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 DDHD1Q8NEL9 900 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 OR10G6Q8NH81 332 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 SH3KBP1Q96B97 665 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 DCUN1D1Q96GG9 259 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 DNAJC1Q96KC8 554 aaKnown RBP10.5□□□□□ -0.73
SHMT2-213ENST00000554600 TLR10Q9BXR5 811 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 SEMA6CQ9H3T2 930 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 FAM96AQ9H5X1 160 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 ETNK1Q9HBU6 452 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 ARNT2Q9HBZ2 717 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 RAB6BQ9NRW1 208 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 CPNE7Q9UBL6 633 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 LOXL2Q9Y4K0 774 aa10.5□□□□□ -0.73
SHMT2-213ENST00000554600 SPTBP11277 2137 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 MAST4O15021 2626 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 LAMA5O15230 3695 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 ERI2A8K979 691 aaKnown RBP10.49□□□□□ -0.73
SHMT2-213ENST00000554600 GAPDHSO14556 408 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-213ENST00000554600 ZSCAN12O43309 604 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 DUX1O43812 170 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 POP7O75817 140 aaKnown RBP10.49□□□□□ -0.73
SHMT2-213ENST00000554600 RALBP11234 206 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 ITPKBP27987 946 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 CD1CP29017 333 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 MC4RP32245 332 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 CA5AP35218 305 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 EIF2S3P41091 472 aaKnown RBP10.49□□□□□ -0.73
SHMT2-213ENST00000554600 HALP42357 657 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 CLCNKAP51800 687 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 ZNF140P52738 457 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-213ENST00000554600 ERVPABLB-1P60509 514 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 GPLD1P80108 840 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 CDH17Q12864 832 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 NR1D2Q14995 579 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 CCNG2Q16589 344 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 CCDC38Q502W7 563 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-213ENST00000554600 BEND7Q8N7W2 519 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-213ENST00000554600 RCBTB1Q8NDN9 531 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 ZNF248Q8NDW4 579 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 OR52K1Q8NGK4 314 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 SNIP1Q8TAD8 396 aaKnown RBP10.49□□□□□ -0.73
SHMT2-213ENST00000554600 DTX3LQ8TDB6 740 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 NAT14Q8WUY8 206 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 KCNE4Q8WWG9 221 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 NCSTNQ92542 709 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 ULK4Q96C45 1275 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 CXorf40BQ96DE9 158 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 RTP4Q96DX8 246 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 SGF29Q96ES7 293 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 CCDC74BQ96LY2 380 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 SLC46A1Q96NT5 459 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 CMKLR1Q99788 373 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-213ENST00000554600 SARS2Q9NP81 518 aaKnown RBP10.49□□□□□ -0.73
SHMT2-213ENST00000554600 ASCL3Q9NQ33 180 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 SMOXQ9NWM0 555 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 SCHIP1Q9P0W5 487 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-213ENST00000554600 PAK5Q9P286 719 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 PSMD13Q9UNM6 376 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 PCDHGA8Q9Y5G5 932 aa10.49□□□□□ -0.73
SHMT2-213ENST00000554600 ITPR1Q14643 2758 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 ANKRD12Q6UB98 2062 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 IGHV5-10-1A0A0J9YXX1 117 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 A6NCN8 305 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 OR52A4PA6NMU1 304 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 A8MU76 341 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 CFAP99D6REC4 459 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 LDB2O43679 373 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 DXOO77932 396 aaKnown RBP10.48□□□□□ -0.73
SHMT2-213ENST00000554600 APRTP07741 180 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 ITGA2BP08514 1039 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 ITIH1P19827 911 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 CSF2RBP32927 897 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 CSTF2P33240 577 aaKnown RBP eCLIP10.48□□□□□ -0.73
SHMT2-213ENST00000554600 KCNJ1P48048 391 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 TERF1P54274 439 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 XIAPP98170 497 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 ZFP36L1Q07352 338 aaKnown RBP10.48□□□□□ -0.73
SHMT2-213ENST00000554600 C16orf72Q14CZ0 275 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 SIX1Q15475 284 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-213ENST00000554600 CLPPQ16740 277 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-213ENST00000554600 SNX20Q7Z614 316 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 C11orf96Q7Z7L8 435 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 SLITRK4Q8IW52 837 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 KLHDC8BQ8IXV7 354 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 NXPE1Q8N323 547 aa10.48□□□□□ -0.73
SHMT2-213ENST00000554600 ZNF514Q96K75 400 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-213ENST00000554600 COPS8Q99627 209 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms