RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ZNF432O94892 652 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 ATP1A1P05023 1023 aaKnown RBP4.88□□□□□ -1.63
SCFD1-211ENST00000554437 PRR23D2P0DMB1 279 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-211ENST00000554437 CETPP11597 493 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 HOXD13P35453 343 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 FMO5P49326 533 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 ROR1Q01973 937 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 CREB5Q02930 508 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 IRF3Q14653 427 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 ZRSR1Q15695 479 aaKnown RBP4.88□□□□□ -1.63
SCFD1-211ENST00000554437 RARS2Q5T160 578 aaKnown RBP4.88□□□□□ -1.63
SCFD1-211ENST00000554437 STXBP5Q5T5C0 1151 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 FAM171BQ6P995 826 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 GDPD4Q6W3E5 623 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 ZNF771Q7L3S4 317 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-211ENST00000554437 ATG9AQ7Z3C6 839 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 DSG4Q86SJ6 1040 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 ARID3BQ8IVW6 561 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-211ENST00000554437 RPAP2Q8IXW5 612 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-211ENST00000554437 PM20D2Q8IYS1 436 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 SLC5A8Q8N695 610 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 KBTBD3Q8NAB2 608 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 PPP4R1Q8TF05 950 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 TMEM255BQ8WV15 326 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 FAM120BQ96EK7 910 aaKnown RBP4.88□□□□□ -1.63
SCFD1-211ENST00000554437 EPYCQ99645 322 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 FKRPQ9H9S5 495 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 TCP11L1Q9NUJ3 509 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 NSMCE4AQ9NXX6 385 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 VPS28Q9UK41 221 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 B3GALT5Q9Y2C3 310 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 DLGAP4Q9Y2H0 992 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 PRAG1Q86YV5 1406 aa4.88□□□□□ -1.63
SCFD1-211ENST00000554437 SCN5AQ14524 2016 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 ZCWPW2A0A1B0GU75 182 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 A0A1W2PP11 408 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 OR5K3A6NET4 321 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 CDRT15L2A8MXV6 281 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 EIF3DO15371 548 aaKnown RBP eCLIP4.87□□□□□ -1.63
SCFD1-211ENST00000554437 ZBTB43O43298 467 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 XPNPEP2O43895 674 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 GLULP15104 373 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 HRH2P25021 359 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 OAS2P29728 719 aaKnown RBP4.87□□□□□ -1.63
SCFD1-211ENST00000554437 MFAP4P55083 255 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 CD81P60033 236 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 ARL16Q0P5N6 197 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 DUSP28Q4G0W2 176 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 MFSD4BQ5TF39 518 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 KCTD8Q6ZWB6 473 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 SZRD1Q7Z422 152 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 EPHX4Q8IUS5 362 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 C17orf53Q8N3J3 647 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-211ENST00000554437 GCSAMQ8N6F7 178 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 METTL27Q8N6F8 245 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-211ENST00000554437 SLC38A9Q8NBW4 561 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 ATP6V1E2Q96A05 226 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 PHF21AQ96BD5 680 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 SAT2Q96F10 170 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-211ENST00000554437 INPP4AQ96PE3 977 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-211ENST00000554437 POLR3CQ9BUI4 534 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-211ENST00000554437 RAD21L1Q9H4I0 556 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 TCF7L2Q9NQB0 619 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 PAG1Q9NWQ8 432 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 KLHL9Q9P2J3 617 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 ADD3Q9UEY8 706 aaKnown RBP4.87□□□□□ -1.63
SCFD1-211ENST00000554437 TBC1D29Q9UFV1 150 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 ISY1Q9ULR0 285 aaKnown RBP4.87□□□□□ -1.63
SCFD1-211ENST00000554437 GPR34Q9UPC5 381 aa4.87□□□□□ -1.63
SCFD1-211ENST00000554437 RSF1Q96T23 1441 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-211ENST00000554437 AGAP14A8MT82 685 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 B4DLN1 442 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 TMEM178BH3BS89 294 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 CAPN9O14815 690 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 ZNF217O75362 1048 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 CRYAAP02489 173 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 ALOX12P18054 663 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 NR2F2P24468 414 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 MRPL12P52815 198 aaKnown RBP4.86□□□□□ -1.63
SCFD1-211ENST00000554437 CTSCP53634 463 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 PITX1P78337 314 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-211ENST00000554437 RUNX1T1Q06455 604 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 KCNC3Q14003 757 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 MVPQ14764 893 aaKnown RBP4.86□□□□□ -1.63
SCFD1-211ENST00000554437 MEA1Q16626 185 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 MEP1AQ16819 746 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 RILPL1Q5EBL4 403 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 RAB41Q5JT25 222 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 PDSS1Q5T2R2 415 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 CFAP58Q5T655 872 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 TPRG1Q6ZUI0 275 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 PLEKHM3Q6ZWE6 761 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 SNX32Q86XE0 403 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 SCYL3Q8IZE3 742 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 DMBX1Q8NFW5 382 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 OR52I2Q8NH67 350 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 LINGO1Q96FE5 620 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 ZMAT2Q96NC0 199 aaKnown RBP4.86□□□□□ -1.63
SCFD1-211ENST00000554437 LRRC1Q9BTT6 524 aa4.86□□□□□ -1.63
SCFD1-211ENST00000554437 DNAJC18Q9H819 358 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms